RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSM1	YGR171C	ECM11	Q04110	302 aa		3	□□□□□ -1.93
MSM1	YGR171C	YDL114W	Q07530	308 aa		3	□□□□□ -1.93
MSM1	YGR171C	YDL144C	Q07589	356 aa		3	□□□□□ -1.93
MSM1	YGR171C	ALE1	Q08548	619 aa		3	□□□□□ -1.93
MSM1	YGR171C	SRO7	Q12038	1033 aa		3	□□□□□ -1.93
MSM1	YGR171C	TMS1	Q12116	473 aa		3	□□□□□ -1.93
MSM1	YGR171C	POM33	Q12164	279 aa		3	□□□□□ -1.93
MSM1	YGR171C	LAG2	Q92325	660 aa		3	□□□□□ -1.93
MSM1	YGR171C	RAD9	P14737	1309 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	YBR121C-A	P0C5L4	52 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	RPS8A	P0CX39	200 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	RPS8B	P0CX40	200 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	MSI1	P13712	422 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
MSM1	YGR171C	RIB1	P38066	345 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	RPL10	P41805	221 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	CIN2	P46670	268 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	YJR085C	P47131	105 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	RMR1	P53060	241 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	MST27	P53176	234 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	SWC4	P53201	476 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	ELP3	Q02908	557 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	OST6	Q03723	332 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	GIM5	Q04493	163 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	ERV2	Q12284	196 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	CDC33	P07260	213 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	CBS2	P14905	389 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	CBF1	P17106	351 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	RPL16B	P26785	198 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	FUN26	P31381	517 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	IES6	P32617	166 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	MRPL10	P36520	322 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	YGR210C	P42942	411 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	YFL040W	P43562	540 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	DCR2	Q05924	578 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	RIF2	Q06208	395 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	ABP140	Q08641	628 aa	Known RBP	2.99	□□□□□ -1.93
MSM1	YGR171C	YDL199C	Q12407	687 aa		2.99	□□□□□ -1.93
MSM1	YGR171C	SKI3	P17883	1432 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	HEM4	P06174	275 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	RPS18A	P0CX55	146 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	RPS18B	P0CX56	146 aa	Predicted RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	CTA1	P15202	515 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	RPB5	P20434	215 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	RPS5	P26783	225 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	SSO1	P32867	290 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	CSE2	P33308	149 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	CBT1	P36038	271 aa	Predicted RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	OPY1	P38271	328 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	MIC12	P38341	106 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	PRS2	P38620	318 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	SMF2	P38778	549 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	TRM5	P38793	499 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	MIG2	P53035	382 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	GET1	P53192	235 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	CLD1	P53264	445 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	HRI1	Q05905	244 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	CTR3	Q06686	241 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	CSM4	Q08955	156 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	YDL109C	Q12103	647 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	PER33	Q12144	273 aa		2.98	□□□□□ -1.93
MSM1	YGR171C	UTP23	Q12339	254 aa	Known RBP	2.98	□□□□□ -1.93
MSM1	YGR171C	RPL23A	P0CX41	137 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	RPL23B	P0CX42	137 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	NAM9	P27929	486 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	ARO2	P28777	376 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	AST1	P35183	429 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	VPS21	P36017	210 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	MRX3	P38172	270 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	CUE1	P38428	203 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	SHC1	P39000	512 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	NPT1	P39683	429 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	YNL208W	P40159	199 aa	Known RBP	2.97	□□□□□ -1.93
MSM1	YGR171C	PAN6	P40459	309 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	DSN1	P40568	576 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	YFR057W	P43625	151 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	RPC17	P47076	161 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	ZRG17	P53735	605 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	FUS2	Q05670	677 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	SNF8	Q12483	233 aa		2.97	□□□□□ -1.93
MSM1	YGR171C	RPL31A	P0C2H8	113 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	POX1	P13711	748 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YAK1	P14680	807 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YMR31	P19955	123 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	CHA1	P25379	360 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	TPS2	P31688	896 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	GDH2	P33327	1092 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	PRE6	P40303	254 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	REE1	P40893	198 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YPI1	P43587	155 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	ASG7	P46993	209 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YJR012C	P47087	207 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YPT32	P51996	222 aa	Known RBP	2.96	□□□□□ -1.93
MSM1	YGR171C	SNX41	Q04053	625 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	YDR222W	Q04925	415 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	ATG17	Q06410	417 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	TLG2	Q08144	397 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	GPM2	Q12008	311 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	VIK1	Q12045	647 aa		2.96	□□□□□ -1.93
MSM1	YGR171C	JID1	Q12350	301 aa		2.96	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms