RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W CYK3Q07533 885 aa3.97□□□□□ -1.77
PRE9YGR135W SYC1Q08553 188 aaPredicted RBP3.97□□□□□ -1.77
PRE9YGR135W RRG7Q08774 242 aaPredicted RBP3.97□□□□□ -1.77
PRE9YGR135W YPL199CQ08954 240 aa3.97□□□□□ -1.77
PRE9YGR135W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PRE9YGR135W YDL199CQ12407 687 aa3.97□□□□□ -1.77
PRE9YGR135W YIL002W-AQ3E7Z5 69 aa3.97□□□□□ -1.77
PRE9YGR135W SUS1Q6WNK7 96 aa3.97□□□□□ -1.77
PRE9YGR135W RAS2P01120 322 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W ILV5P06168 395 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W SPT3P06844 337 aa3.96□□□□□ -1.78
PRE9YGR135W DST1P07273 309 aa3.96□□□□□ -1.78
PRE9YGR135W SCH9P11792 824 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W HOM2P13663 365 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W GLN3P18494 730 aa3.96□□□□□ -1.78
PRE9YGR135W PRP2P20095 876 aaPredicted RBP3.96□□□□□ -1.78
PRE9YGR135W YCR099CP25657 155 aa3.96□□□□□ -1.78
PRE9YGR135W MSN2P33748 704 aa3.96□□□□□ -1.78
PRE9YGR135W ATP3P38077 311 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W APD1P38281 316 aa3.96□□□□□ -1.78
PRE9YGR135W BIG1P38813 335 aa3.96□□□□□ -1.78
PRE9YGR135W YER186CP40101 306 aa3.96□□□□□ -1.78
PRE9YGR135W YFR018CP43599 363 aa3.96□□□□□ -1.78
PRE9YGR135W SNG1P46950 547 aa3.96□□□□□ -1.78
PRE9YGR135W LSM1P47017 172 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W JHD2P47156 728 aaPredicted RBP3.96□□□□□ -1.78
PRE9YGR135W TIS11P47977 285 aa3.96□□□□□ -1.78
PRE9YGR135W RPS12P48589 143 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W YGL117WP53133 265 aa3.96□□□□□ -1.78
PRE9YGR135W MPS2P53159 387 aa3.96□□□□□ -1.78
PRE9YGR135W LSM7P53905 115 aaKnown RBP3.96□□□□□ -1.78
PRE9YGR135W TRM82Q03774 444 aa3.96□□□□□ -1.78
PRE9YGR135W AIM36Q03798 255 aa3.96□□□□□ -1.78
PRE9YGR135W YMR034CQ05131 434 aaPredicted RBP3.96□□□□□ -1.78
PRE9YGR135W ASR1Q06834 288 aa3.96□□□□□ -1.78
PRE9YGR135W YLL007CQ07799 665 aa3.96□□□□□ -1.78
PRE9YGR135W RRT8Q08219 342 aa3.96□□□□□ -1.78
PRE9YGR135W APC5Q08683 685 aa3.96□□□□□ -1.78
PRE9YGR135W ICT1Q12385 394 aa3.96□□□□□ -1.78
PRE9YGR135W SNF8Q12483 233 aa3.96□□□□□ -1.78
PRE9YGR135W CSR2Q12734 1121 aa3.96□□□□□ -1.78
PRE9YGR135W RPL7AP05737 244 aaKnown RBP3.95□□□□□ -1.78
PRE9YGR135W RAD52P06778 471 aaKnown RBP3.95□□□□□ -1.78
PRE9YGR135W SPS2P08459 502 aa3.95□□□□□ -1.78
PRE9YGR135W PET54P10834 293 aa3.95□□□□□ -1.78
PRE9YGR135W YCR006CP25350 157 aa3.95□□□□□ -1.78
PRE9YGR135W ERG9P29704 444 aa3.95□□□□□ -1.78
PRE9YGR135W SNC1P31109 117 aa3.95□□□□□ -1.78
PRE9YGR135W MSS51P32335 436 aa3.95□□□□□ -1.78
PRE9YGR135W EMP70P32802 667 aa3.95□□□□□ -1.78
PRE9YGR135W RSM22P36056 628 aa3.95□□□□□ -1.78
PRE9YGR135W RCK1P38622 512 aa3.95□□□□□ -1.78
PRE9YGR135W EFM1P38732 585 aa3.95□□□□□ -1.78
PRE9YGR135W SBE22P38814 852 aa3.95□□□□□ -1.78
PRE9YGR135W PTI1P39927 425 aaPredicted RBP3.95□□□□□ -1.78
PRE9YGR135W YER184CP39961 794 aa3.95□□□□□ -1.78
PRE9YGR135W EDC3P39998 551 aaKnown RBP3.95□□□□□ -1.78
PRE9YGR135W RRG9P40156 214 aa3.95□□□□□ -1.78
PRE9YGR135W GDS1P41913 522 aa3.95□□□□□ -1.78
PRE9YGR135W MEP2P41948 499 aa3.95□□□□□ -1.78
PRE9YGR135W YAE1P47118 141 aaPredicted RBP3.95□□□□□ -1.78
PRE9YGR135W TOM22P49334 152 aa3.95□□□□□ -1.78
PRE9YGR135W POP6P53218 158 aa3.95□□□□□ -1.78
PRE9YGR135W SHY1P53266 389 aa3.95□□□□□ -1.78
PRE9YGR135W IDP3P53982 420 aaKnown RBP3.95□□□□□ -1.78
PRE9YGR135W CDC14Q00684 551 aa3.95□□□□□ -1.78
PRE9YGR135W ARV1Q06541 321 aa3.95□□□□□ -1.78
PRE9YGR135W RAD34Q06665 692 aa3.95□□□□□ -1.78
PRE9YGR135W DDC1Q08949 612 aa3.95□□□□□ -1.78
PRE9YGR135W SIA1Q12212 622 aa3.95□□□□□ -1.78
PRE9YGR135W RPL7BQ12213 244 aaKnown RBP3.95□□□□□ -1.78
PRE9YGR135W YOR012WQ12351 137 aa3.95□□□□□ -1.78
PRE9YGR135W RIF1P29539 1916 aa3.94□□□□□ -1.78
PRE9YGR135W YER145C-AA0A023PYF4 145 aa3.94□□□□□ -1.78
PRE9YGR135W HIS1P00498 297 aaKnown RBP3.94□□□□□ -1.78
PRE9YGR135W YGL041W-AP0C5N3 154 aa3.94□□□□□ -1.78
PRE9YGR135W UNG1P12887 359 aa3.94□□□□□ -1.78
PRE9YGR135W PHO80P20052 293 aa3.94□□□□□ -1.78
PRE9YGR135W KIN3P22209 435 aa3.94□□□□□ -1.78
PRE9YGR135W YCR102CP25608 368 aa3.94□□□□□ -1.78
PRE9YGR135W PMT2P31382 759 aa3.94□□□□□ -1.78
PRE9YGR135W NDC1P32500 655 aa3.94□□□□□ -1.78
PRE9YGR135W ECM25P32525 599 aa3.94□□□□□ -1.78
PRE9YGR135W MTR2P34232 184 aaKnown RBP3.94□□□□□ -1.78
PRE9YGR135W GEP4P38812 185 aa3.94□□□□□ -1.78
PRE9YGR135W MNL1P38888 796 aa3.94□□□□□ -1.78
PRE9YGR135W DHH1P39517 506 aaKnown RBP3.94□□□□□ -1.78
PRE9YGR135W ERG10P41338 398 aaKnown RBP3.94□□□□□ -1.78
PRE9YGR135W POP1P41812 875 aa3.94□□□□□ -1.78
PRE9YGR135W ATG18P43601 500 aa3.94□□□□□ -1.78
PRE9YGR135W IRC7P43623 340 aa3.94□□□□□ -1.78
PRE9YGR135W PMT4P46971 762 aa3.94□□□□□ -1.78
PRE9YGR135W EAF6P47128 113 aa3.94□□□□□ -1.78
PRE9YGR135W HMS2P47175 358 aa3.94□□□□□ -1.78
PRE9YGR135W SSN8P47821 323 aa3.94□□□□□ -1.78
PRE9YGR135W ROG1P53118 685 aa3.94□□□□□ -1.78
PRE9YGR135W YGR117CP53270 476 aa3.94□□□□□ -1.78
PRE9YGR135W ERV29P53337 310 aa3.94□□□□□ -1.78
PRE9YGR135W APM1Q00776 475 aaPredicted RBP3.94□□□□□ -1.78
PRE9YGR135W EGD1Q02642 157 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms