RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeastyeast

Gene UBC13, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC13YDR092W MED4Q12343 284 aa2.28□□□□□ -2.04
UBC13YDR092W ERP3Q12403 225 aa2.28□□□□□ -2.04
UBC13YDR092W CBP2P03874 630 aaPredicted RBP2.27□□□□□ -2.05
UBC13YDR092W RPL24AP04449 155 aaKnown RBP2.27□□□□□ -2.05
UBC13YDR092W GAL3P13045 520 aa2.27□□□□□ -2.05
UBC13YDR092W SSO2P39926 295 aa2.27□□□□□ -2.05
UBC13YDR092W EDC2P40023 145 aaPredicted RBP2.27□□□□□ -2.05
UBC13YDR092W OSW5P40219 148 aa2.27□□□□□ -2.05
UBC13YDR092W NAS2P40555 220 aa2.27□□□□□ -2.05
UBC13YDR092W INA22P40576 216 aa2.27□□□□□ -2.05
UBC13YDR092W KEL2P50090 882 aa2.27□□□□□ -2.05
UBC13YDR092W SHE4P51534 789 aa2.27□□□□□ -2.05
UBC13YDR092W YLR297WQ05899 129 aa2.27□□□□□ -2.05
UBC13YDR092W YPL264CQ08980 353 aa2.27□□□□□ -2.05
UBC13YDR092W CDC37P06101 506 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W RPS23AP0CX29 145 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W RPS23BP0CX30 145 aa2.26□□□□□ -2.05
UBC13YDR092W RPL18AP0CX49 186 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W RPL18BP0CX50 186 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W SPS100P13130 326 aa2.26□□□□□ -2.05
UBC13YDR092W MRPL20P22354 195 aaPredicted RBP2.26□□□□□ -2.05
UBC13YDR092W VPS3P23643 1011 aa2.26□□□□□ -2.05
UBC13YDR092W IFM1P25038 676 aa2.26□□□□□ -2.05
UBC13YDR092W ARO4P32449 370 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W TKL2P33315 681 aa2.26□□□□□ -2.05
UBC13YDR092W END3P39013 349 aa2.26□□□□□ -2.05
UBC13YDR092W MNN9P39107 395 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W HSH155P49955 971 aaKnown RBP2.26□□□□□ -2.05
UBC13YDR092W VOA1P53262 265 aa2.26□□□□□ -2.05
UBC13YDR092W MPP6P53725 186 aaPredicted RBP2.26□□□□□ -2.05
UBC13YDR092W RNH1Q04740 348 aa2.26□□□□□ -2.05
UBC13YDR092W MIM1Q08176 113 aa2.26□□□□□ -2.05
UBC13YDR092W HRT1Q08273 121 aa2.26□□□□□ -2.05
UBC13YDR092W IES3Q12345 250 aa2.26□□□□□ -2.05
UBC13YDR092W ICL1P28240 557 aaPredicted RBP2.25□□□□□ -2.05
UBC13YDR092W AIM29P36154 155 aa2.25□□□□□ -2.05
UBC13YDR092W HSM3P38348 480 aa2.25□□□□□ -2.05
UBC13YDR092W SOP4P39543 234 aaPredicted RBP2.25□□□□□ -2.05
UBC13YDR092W GCN20P43535 752 aaKnown RBP2.25□□□□□ -2.05
UBC13YDR092W YFR045WP43617 309 aa2.25□□□□□ -2.05
UBC13YDR092W LOH1P47055 219 aa2.25□□□□□ -2.05
UBC13YDR092W GIM3P53900 129 aa2.25□□□□□ -2.05
UBC13YDR092W SNX41Q04053 625 aa2.25□□□□□ -2.05
UBC13YDR092W BCP1Q06338 283 aa2.25□□□□□ -2.05
UBC13YDR092W UTP23Q12339 254 aaKnown RBP2.25□□□□□ -2.05
UBC13YDR092W RPB4P20433 221 aaPredicted RBP2.24□□□□□ -2.05
UBC13YDR092W GCG1P32656 232 aaKnown RBP2.24□□□□□ -2.05
UBC13YDR092W ZRT1P32804 376 aa2.24□□□□□ -2.05
UBC13YDR092W MRPL6P32904 214 aa2.24□□□□□ -2.05
UBC13YDR092W PET8P38921 284 aa2.24□□□□□ -2.05
UBC13YDR092W YFL040WP43562 540 aa2.24□□□□□ -2.05
UBC13YDR092W LIF1P53150 421 aa2.24□□□□□ -2.05
UBC13YDR092W YNL040WP53960 456 aaPredicted RBP2.24□□□□□ -2.05
UBC13YDR092W ACT1P60010 375 aaKnown RBP2.24□□□□□ -2.05
UBC13YDR092W YDR114CQ04597 100 aa2.24□□□□□ -2.05
UBC13YDR092W YOR292CQ08743 309 aa2.24□□□□□ -2.05
UBC13YDR092W RRP36Q12481 300 aaPredicted RBP2.24□□□□□ -2.05
UBC13YDR092W TDH3P00359 332 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
UBC13YDR092W KSS1P14681 368 aa2.23□□□□□ -2.05
UBC13YDR092W YPS1P32329 569 aa2.23□□□□□ -2.05
UBC13YDR092W ALK2P32789 676 aaPredicted RBP2.23□□□□□ -2.05
UBC13YDR092W COY1P34237 679 aa2.23□□□□□ -2.05
UBC13YDR092W MRPL37P36532 105 aa2.23□□□□□ -2.05
UBC13YDR092W TDA11P38854 504 aa2.23□□□□□ -2.05
UBC13YDR092W AGX1P43567 385 aa2.23□□□□□ -2.05
UBC13YDR092W ECO1P43605 281 aa2.23□□□□□ -2.05
UBC13YDR092W YGL088WP53151 121 aa2.23□□□□□ -2.05
UBC13YDR092W OKP1P53298 406 aa2.23□□□□□ -2.05
UBC13YDR092W TIM11P81449 96 aaPredicted RBP2.23□□□□□ -2.05
UBC13YDR092W YPL113CQ02961 396 aa2.23□□□□□ -2.05
UBC13YDR092W SEC13Q04491 297 aaKnown RBP2.23□□□□□ -2.05
UBC13YDR092W GTO3Q04806 366 aa2.23□□□□□ -2.05
UBC13YDR092W ATG38Q05789 226 aaKnown RBP2.23□□□□□ -2.05
UBC13YDR092W ARC18Q05933 178 aaKnown RBP2.23□□□□□ -2.05
UBC13YDR092W ARV1Q06541 321 aa2.23□□□□□ -2.05
UBC13YDR092W SAM4Q08985 325 aaKnown RBP2.23□□□□□ -2.05
UBC13YDR092W DCP1Q12517 231 aaPredicted RBP2.23□□□□□ -2.05
UBC13YDR092W LAG2Q92325 660 aa2.23□□□□□ -2.05
UBC13YDR092W INO80P53115 1489 aa2.22□□□□□ -2.05
UBC13YDR092W SSA3P09435 649 aaKnown RBP2.22□□□□□ -2.05
UBC13YDR092W DBP3P20447 523 aaKnown RBP2.22□□□□□ -2.05
UBC13YDR092W SRB4P32569 687 aa2.22□□□□□ -2.05
UBC13YDR092W UTR5P32630 166 aa2.22□□□□□ -2.05
UBC13YDR092W PPQ1P32945 549 aa2.22□□□□□ -2.05
UBC13YDR092W MCH2P36032 473 aa2.22□□□□□ -2.05
UBC13YDR092W YFL064CP43540 174 aa2.22□□□□□ -2.05
UBC13YDR092W MRX5P47007 382 aa2.22□□□□□ -2.05
UBC13YDR092W SWC4P53201 476 aa2.22□□□□□ -2.05
UBC13YDR092W MRPL50P53724 139 aa2.22□□□□□ -2.05
UBC13YDR092W YPL080CQ02826 108 aa2.22□□□□□ -2.05
UBC13YDR092W VPS20Q04272 221 aa2.22□□□□□ -2.05
UBC13YDR092W YDR222WQ04925 415 aa2.22□□□□□ -2.05
UBC13YDR092W STE23Q06010 1027 aa2.22□□□□□ -2.05
UBC13YDR092W KAP95Q06142 861 aaKnown RBP2.22□□□□□ -2.05
UBC13YDR092W YLR446WQ06204 433 aa2.22□□□□□ -2.05
UBC13YDR092W DXO1Q06349 442 aa2.22□□□□□ -2.05
UBC13YDR092W IZH4Q99393 312 aa2.22□□□□□ -2.05
UBC13YDR092W UGA1P17649 471 aa2.21□□□□□ -2.06
UBC13YDR092W VPS1P21576 704 aaKnown RBP2.21□□□□□ -2.06
UBC13YDR092W DAL81P21657 970 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms