RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C MST27P53176 234 aa2.56□□□□□ -2
SOK1YDR006C YGR168CP53293 376 aa2.56□□□□□ -2
SOK1YDR006C SSU72P53538 206 aaPredicted RBP2.56□□□□□ -2
SOK1YDR006C UTP15Q04305 513 aaKnown RBP2.56□□□□□ -2
SOK1YDR006C ADH6Q04894 360 aaKnown RBP2.56□□□□□ -2
SOK1YDR006C GAS2Q06135 555 aa2.56□□□□□ -2
SOK1YDR006C RFU1Q08003 200 aa2.56□□□□□ -2
SOK1YDR006C PLB3Q08108 686 aa2.56□□□□□ -2
SOK1YDR006C AIM39Q08223 395 aa2.56□□□□□ -2
SOK1YDR006C SKI7Q08491 747 aaPredicted RBP2.56□□□□□ -2
SOK1YDR006C YRA1Q12159 226 aaKnown RBP2.56□□□□□ -2
SOK1YDR006C MCT1Q12283 360 aa2.56□□□□□ -2
SOK1YDR006C RAV1P47104 1357 aa2.56□□□□□ -2
SOK1YDR006C RPL7AP05737 244 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C DST1P07273 309 aa2.55□□□□□ -2
SOK1YDR006C SEC4P07560 215 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C PUT1P09368 476 aa2.55□□□□□ -2
SOK1YDR006C GCY1P14065 312 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SOK1YDR006C MTF1P14908 341 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C TMT1P32643 299 aa2.55□□□□□ -2
SOK1YDR006C AST1P35183 429 aa2.55□□□□□ -2
SOK1YDR006C BDH2P39713 417 aa2.55□□□□□ -2
SOK1YDR006C BDH1P39714 382 aa2.55□□□□□ -2
SOK1YDR006C AIM24P47127 394 aa2.55□□□□□ -2
SOK1YDR006C GET1P53192 235 aa2.55□□□□□ -2
SOK1YDR006C COG2P53271 262 aa2.55□□□□□ -2
SOK1YDR006C CPR8P53728 308 aa2.55□□□□□ -2
SOK1YDR006C SLD5Q03406 294 aa2.55□□□□□ -2
SOK1YDR006C RUB1Q03919 77 aa2.55□□□□□ -2
SOK1YDR006C FCY22Q12119 530 aa2.55□□□□□ -2
SOK1YDR006C RPL7BQ12213 244 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C RDI1Q12434 202 aa2.55□□□□□ -2
SOK1YDR006C RPL27AP0C2H6 136 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C RPL27BP0C2H7 136 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C CUP2P15315 225 aa2.55□□□□□ -2
SOK1YDR006C YSR3P23501 404 aa2.55□□□□□ -2
SOK1YDR006C SKG6P32900 734 aaPredicted RBP2.55□□□□□ -2
SOK1YDR006C ATO2P32907 282 aa2.55□□□□□ -2
SOK1YDR006C MCR1P36060 302 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C CYC2P38909 366 aa2.55□□□□□ -2
SOK1YDR006C YER079WP40052 210 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C RTS2P40962 232 aa2.55□□□□□ -2
SOK1YDR006C VHT1P53241 593 aa2.55□□□□□ -2
SOK1YDR006C YPL014WQ02606 381 aa2.55□□□□□ -2
SOK1YDR006C MSA1Q08471 629 aa2.55□□□□□ -2
SOK1YDR006C YLR111WQ12528 110 aa2.55□□□□□ -2
SOK1YDR006C RIB3Q99258 208 aa2.55□□□□□ -2
SOK1YDR006C REP1P03871 373 aa2.55□□□□□ -2
SOK1YDR006C CMK2P22517 447 aa2.55□□□□□ -2
SOK1YDR006C ATG15P25641 520 aa2.55□□□□□ -2
SOK1YDR006C YCR090CP25654 182 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C ITR2P30606 609 aa2.55□□□□□ -2
SOK1YDR006C NUP2P32499 720 aa2.55□□□□□ -2
SOK1YDR006C SPC34P36131 295 aa2.55□□□□□ -2
SOK1YDR006C YBL081WP38180 368 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C DER1P38307 211 aa2.55□□□□□ -2
SOK1YDR006C PET8P38921 284 aa2.55□□□□□ -2
SOK1YDR006C VAB2P40003 282 aa2.55□□□□□ -2
SOK1YDR006C UFE1P41834 346 aa2.55□□□□□ -2
SOK1YDR006C ALB1P47019 175 aaPredicted RBP2.55□□□□□ -2
SOK1YDR006C IRC18P47056 224 aa2.55□□□□□ -2
SOK1YDR006C COX16P47081 118 aa2.55□□□□□ -2
SOK1YDR006C UBC13P52490 153 aa2.55□□□□□ -2
SOK1YDR006C YNL181WP53878 407 aa2.55□□□□□ -2
SOK1YDR006C YNL095CP53932 642 aa2.55□□□□□ -2
SOK1YDR006C YVH1Q02256 364 aaKnown RBP2.55□□□□□ -2
SOK1YDR006C RMI1Q02685 241 aa2.55□□□□□ -2
SOK1YDR006C PEX10Q05568 337 aa2.55□□□□□ -2
SOK1YDR006C TPO3Q06451 622 aa2.55□□□□□ -2
SOK1YDR006C MIM1Q08176 113 aa2.55□□□□□ -2
SOK1YDR006C SME1Q12330 94 aaPredicted RBP2.55□□□□□ -2
SOK1YDR006C DCN1Q12395 269 aa2.55□□□□□ -2
SOK1YDR006C RRI1Q12468 440 aa2.55□□□□□ -2
SOK1YDR006C AGC1Q12482 902 aa2.55□□□□□ -2
SOK1YDR006C ACC1Q00955 2233 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C FAS1P07149 2051 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C DPM1P14020 267 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C VPS1P21576 704 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C RNA14P25298 677 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C YKL071WP36086 256 aa2.54□□□□□ -2
SOK1YDR006C YER076CP40049 302 aa2.54□□□□□ -2
SOK1YDR006C VRG4P40107 337 aa2.54□□□□□ -2
SOK1YDR006C GLC8P41818 229 aa2.54□□□□□ -2
SOK1YDR006C MIC26P50087 233 aa2.54□□□□□ -2
SOK1YDR006C PRM8P53174 237 aa2.54□□□□□ -2
SOK1YDR006C ELP3Q02908 557 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C TRM82Q03774 444 aa2.54□□□□□ -2
SOK1YDR006C PEX12Q04370 399 aa2.54□□□□□ -2
SOK1YDR006C YOR283WQ12040 230 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C YOR114WQ12219 294 aa2.54□□□□□ -2
SOK1YDR006C MRS3P10566 314 aa2.54□□□□□ -2
SOK1YDR006C MDM10P18409 493 aa2.54□□□□□ -2
SOK1YDR006C YCR025CP25352 136 aa2.54□□□□□ -2
SOK1YDR006C SAC1P32368 623 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C PHA2P32452 334 aa2.54□□□□□ -2
SOK1YDR006C RPS1AP33442 255 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C SOF1P33750 489 aaKnown RBP2.54□□□□□ -2
SOK1YDR006C UPS2P35200 230 aa2.54□□□□□ -2
SOK1YDR006C SRP102P36057 244 aaPredicted RBP2.54□□□□□ -2
SOK1YDR006C YPT35P38815 214 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms