RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W AIM6Q07716 390 aa5.39□□□□□ -1.55
SUB2YDL084W ENT4Q07872 247 aa5.39□□□□□ -1.55
SUB2YDL084W YDR018CQ12185 396 aa5.39□□□□□ -1.55
SUB2YDL084W RKI1Q12189 258 aa5.39□□□□□ -1.55
SUB2YDL084W PST2Q12335 198 aaKnown RBP5.39□□□□□ -1.55
SUB2YDL084W TY1B-JR2P47100 1755 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W TY1B-ER2Q03619 1755 aa5.38□□□□□ -1.55
SUB2YDL084W TY1B-MR1Q04214 1755 aa5.38□□□□□ -1.55
SUB2YDL084W TY1B-MR2Q04670 1755 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W TY1B-LR1Q12088 1755 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W TY1B-NL1Q12112 1755 aa5.38□□□□□ -1.55
SUB2YDL084W TY1B-GR1Q12141 1755 aa5.38□□□□□ -1.55
SUB2YDL084W TY1B-BLQ12490 1755 aa5.38□□□□□ -1.55
SUB2YDL084W RSF2P46974 1380 aa5.38□□□□□ -1.55
SUB2YDL084W CYC3P06182 269 aa5.38□□□□□ -1.55
SUB2YDL084W CPR1P14832 162 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W CPT1P17898 393 aa5.38□□□□□ -1.55
SUB2YDL084W LDS1P31379 325 aa5.38□□□□□ -1.55
SUB2YDL084W APE2P32454 952 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W PTM1P32857 523 aa5.38□□□□□ -1.55
SUB2YDL084W IST2P38250 946 aa5.38□□□□□ -1.55
SUB2YDL084W HIS2P38635 335 aa5.38□□□□□ -1.55
SUB2YDL084W SRP68P38687 599 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W ARP1P38696 384 aa5.38□□□□□ -1.55
SUB2YDL084W GOS1P38736 223 aa5.38□□□□□ -1.55
SUB2YDL084W IKI1P38874 309 aa5.38□□□□□ -1.55
SUB2YDL084W VPS52P39904 641 aa5.38□□□□□ -1.55
SUB2YDL084W HAT2P39984 401 aa5.38□□□□□ -1.55
SUB2YDL084W SMB1P40018 196 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W AAD14P42884 376 aa5.38□□□□□ -1.55
SUB2YDL084W YCH1P42937 148 aa5.38□□□□□ -1.55
SUB2YDL084W YFR057WP43625 151 aa5.38□□□□□ -1.55
SUB2YDL084W TPN1P53099 579 aa5.38□□□□□ -1.55
SUB2YDL084W TIM8P57744 87 aa5.38□□□□□ -1.55
SUB2YDL084W TRM44Q02648 567 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W YPL108WQ02872 168 aaPredicted RBP5.38□□□□□ -1.55
SUB2YDL084W TMA23Q03525 211 aa5.38□□□□□ -1.55
SUB2YDL084W TDA1Q03533 586 aa5.38□□□□□ -1.55
SUB2YDL084W CGI121Q03705 181 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W YMR160WQ03823 816 aa5.38□□□□□ -1.55
SUB2YDL084W CTK1Q03957 528 aaKnown RBP5.38□□□□□ -1.55
SUB2YDL084W CAC2Q04199 468 aa5.38□□□□□ -1.55
SUB2YDL084W TRM12Q04235 462 aa5.38□□□□□ -1.55
SUB2YDL084W YTH1Q06102 208 aaPredicted RBP5.38□□□□□ -1.55
SUB2YDL084W SPC3Q12133 184 aa5.38□□□□□ -1.55
SUB2YDL084W YLL056CQ12177 298 aa5.38□□□□□ -1.55
SUB2YDL084W YJR112W-AQ3E743 109 aa5.38□□□□□ -1.55
SUB2YDL084W YPR014CQ6B0W2 109 aa5.38□□□□□ -1.55
SUB2YDL084W USO1P25386 1790 aa5.37□□□□□ -1.55
SUB2YDL084W YDR157WA0A023PZE8 133 aa5.37□□□□□ -1.55
SUB2YDL084W GAL80P04387 435 aa5.37□□□□□ -1.55
SUB2YDL084W GCY1P14065 312 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SUB2YDL084W ACO1P19414 778 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SUB2YDL084W PDE1P22434 369 aa5.37□□□□□ -1.55
SUB2YDL084W SEC17P32602 292 aa5.37□□□□□ -1.55
SUB2YDL084W REC104P33323 182 aa5.37□□□□□ -1.55
SUB2YDL084W SGE1P33335 543 aa5.37□□□□□ -1.55
SUB2YDL084W YNK1P36010 153 aaKnown RBP5.37□□□□□ -1.55
SUB2YDL084W APL3P38065 1025 aa5.37□□□□□ -1.55
SUB2YDL084W YPC1P38298 316 aa5.37□□□□□ -1.55
SUB2YDL084W DOG2P38773 246 aa5.37□□□□□ -1.55
SUB2YDL084W PHM8P40025 321 aa5.37□□□□□ -1.55
SUB2YDL084W LSB3P43603 459 aaKnown RBP5.37□□□□□ -1.55
SUB2YDL084W SCD6P45978 349 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SUB2YDL084W TRM9P49957 279 aa5.37□□□□□ -1.55
SUB2YDL084W SUT1P53032 299 aaKnown RBP5.37□□□□□ -1.55
SUB2YDL084W SOK2P53438 785 aaPredicted RBP5.37□□□□□ -1.55
SUB2YDL084W YNL010WP53981 241 aaKnown RBP5.37□□□□□ -1.55
SUB2YDL084W IZH1Q03419 316 aa5.37□□□□□ -1.55
SUB2YDL084W TPP1Q03796 238 aa5.37□□□□□ -1.55
SUB2YDL084W YDR132CQ03900 495 aa5.37□□□□□ -1.55
SUB2YDL084W YMR074CQ04773 145 aa5.37□□□□□ -1.55
SUB2YDL084W GAS2Q06135 555 aa5.37□□□□□ -1.55
SUB2YDL084W NKP2Q06162 153 aa5.37□□□□□ -1.55
SUB2YDL084W IZH3Q07959 543 aa5.37□□□□□ -1.55
SUB2YDL084W SVS1Q12254 260 aa5.37□□□□□ -1.55
SUB2YDL084W ATP14Q12349 124 aa5.37□□□□□ -1.55
SUB2YDL084W GEP5Q12393 293 aa5.37□□□□□ -1.55
SUB2YDL084W RMD5Q12508 421 aa5.37□□□□□ -1.55
SUB2YDL084W UBA3Q99344 299 aa5.37□□□□□ -1.55
SUB2YDL084W BI3Q9ZZW7 517 aa5.37□□□□□ -1.55
SUB2YDL084W RKR1Q04781 1562 aa5.37□□□□□ -1.55
SUB2YDL084W FAS2P19097 1887 aaKnown RBP5.37□□□□□ -1.55
SUB2YDL084W CHC1P22137 1653 aaKnown RBP5.36□□□□□ -1.55
SUB2YDL084W NTE1Q04958 1679 aa5.36□□□□□ -1.55
SUB2YDL084W RPN13O13563 156 aa5.36□□□□□ -1.55
SUB2YDL084W SPO12P17123 173 aa5.36□□□□□ -1.55
SUB2YDL084W MAG1P22134 296 aaKnown RBP5.36□□□□□ -1.55
SUB2YDL084W PCL1P24867 279 aa5.36□□□□□ -1.55
SUB2YDL084W INO2P26798 304 aa5.36□□□□□ -1.55
SUB2YDL084W COQ3P27680 312 aa5.36□□□□□ -1.55
SUB2YDL084W COQ2P32378 372 aa5.36□□□□□ -1.55
SUB2YDL084W MRP20P32387 263 aa5.36□□□□□ -1.55
SUB2YDL084W TRS65P32893 560 aa5.36□□□□□ -1.55
SUB2YDL084W PET10P36139 283 aa5.36□□□□□ -1.55
SUB2YDL084W SET5P38890 526 aaKnown RBP5.36□□□□□ -1.55
SUB2YDL084W SHU2P38957 223 aa5.36□□□□□ -1.55
SUB2YDL084W SHO1P40073 367 aa5.36□□□□□ -1.55
SUB2YDL084W BTT1P40314 149 aaPredicted RBP5.36□□□□□ -1.55
SUB2YDL084W GLC8P41818 229 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms