RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W TIP20P33891 701 aa1.78□□□□□ -2.12
SNC1YAL030W SWD3P38123 315 aa1.78□□□□□ -2.12
SNC1YAL030W YHR045WP38775 560 aa1.78□□□□□ -2.12
SNC1YAL030W SHC1P39000 512 aa1.78□□□□□ -2.12
SNC1YAL030W RPS14BP39516 138 aaKnown RBP1.78□□□□□ -2.12
SNC1YAL030W PEX22P39718 180 aa1.78□□□□□ -2.12
SNC1YAL030W BNA6P43619 295 aa1.78□□□□□ -2.12
SNC1YAL030W TAD2P47058 250 aa1.78□□□□□ -2.12
SNC1YAL030W TPC1P53257 314 aa1.78□□□□□ -2.12
SNC1YAL030W MNT4P53745 580 aa1.78□□□□□ -2.12
SNC1YAL030W TPS1Q00764 495 aaKnown RBP1.78□□□□□ -2.12
SNC1YAL030W GMC1Q04399 608 aa1.78□□□□□ -2.12
SNC1YAL030W KRE28Q04431 385 aa1.78□□□□□ -2.12
SNC1YAL030W MMT2Q08970 484 aa1.78□□□□□ -2.12
SNC1YAL030W VIK1Q12045 647 aa1.78□□□□□ -2.12
SNC1YAL030W BTS1Q12051 335 aa1.78□□□□□ -2.12
SNC1YAL030W POM33Q12164 279 aa1.78□□□□□ -2.12
SNC1YAL030W ATG31Q12421 196 aa1.78□□□□□ -2.12
SNC1YAL030W BI3Q9ZZW7 517 aa1.78□□□□□ -2.12
SNC1YAL030W HIS1P00498 297 aaKnown RBP1.77□□□□□ -2.13
SNC1YAL030W MRP1P10662 321 aaKnown RBP1.77□□□□□ -2.13
SNC1YAL030W BGL2P15703 313 aaKnown RBP1.77□□□□□ -2.13
SNC1YAL030W MRPL20P22354 195 aaPredicted RBP1.77□□□□□ -2.13
SNC1YAL030W PEX3P28795 441 aa1.77□□□□□ -2.13
SNC1YAL030W AEP1P32493 518 aa1.77□□□□□ -2.13
SNC1YAL030W MRPL6P32904 214 aa1.77□□□□□ -2.13
SNC1YAL030W SPT4P32914 102 aaPredicted RBP1.77□□□□□ -2.13
SNC1YAL030W MRPL10P36520 322 aa1.77□□□□□ -2.13
SNC1YAL030W YBR241CP38142 488 aa1.77□□□□□ -2.13
SNC1YAL030W MRX3P38172 270 aa1.77□□□□□ -2.13
SNC1YAL030W PFS1P38872 237 aa1.77□□□□□ -2.13
SNC1YAL030W PET8P38921 284 aa1.77□□□□□ -2.13
SNC1YAL030W VAB2P40003 282 aa1.77□□□□□ -2.13
SNC1YAL030W YER085CP40058 173 aa1.77□□□□□ -2.13
SNC1YAL030W IGD1P43598 195 aa1.77□□□□□ -2.13
SNC1YAL030W YJL118WP47022 219 aa1.77□□□□□ -2.13
SNC1YAL030W IBA57P47158 497 aa1.77□□□□□ -2.13
SNC1YAL030W SDT1P53078 280 aa1.77□□□□□ -2.13
SNC1YAL030W TPN1P53099 579 aa1.77□□□□□ -2.13
SNC1YAL030W CDH1P53197 566 aa1.77□□□□□ -2.13
SNC1YAL030W TIM21P53220 239 aa1.77□□□□□ -2.13
SNC1YAL030W NRM1P53718 249 aa1.77□□□□□ -2.13
SNC1YAL030W MRPL50P53724 139 aa1.77□□□□□ -2.13
SNC1YAL030W YNR066CP53752 436 aa1.77□□□□□ -2.13
SNC1YAL030W RNY1Q02933 434 aaKnown RBP1.77□□□□□ -2.13
SNC1YAL030W OST6Q03723 332 aa1.77□□□□□ -2.13
SNC1YAL030W YML018CQ03730 393 aa1.77□□□□□ -2.13
SNC1YAL030W PEX30Q06169 523 aa1.77□□□□□ -2.13
SNC1YAL030W SDO1Q07953 250 aaKnown RBP1.77□□□□□ -2.13
SNC1YAL030W BSC6Q08280 497 aa1.77□□□□□ -2.13
SNC1YAL030W CSM4Q08955 156 aa1.77□□□□□ -2.13
SNC1YAL030W TFC7Q12415 435 aa1.77□□□□□ -2.13
SNC1YAL030W YBL111CQ3E7Y5 667 aa1.77□□□□□ -2.13
SNC1YAL030W COX4P04037 155 aa1.76□□□□□ -2.13
SNC1YAL030W RPB4P20433 221 aaPredicted RBP1.76□□□□□ -2.13
SNC1YAL030W POF1P25576 258 aa1.76□□□□□ -2.13
SNC1YAL030W TPS2P31688 896 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W PRS1P32895 427 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W CYM1P32898 989 aa1.76□□□□□ -2.13
SNC1YAL030W MSN4P33749 630 aa1.76□□□□□ -2.13
SNC1YAL030W BMH2P34730 273 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SNC1YAL030W GPI18P38211 433 aa1.76□□□□□ -2.13
SNC1YAL030W SDS24P38314 527 aa1.76□□□□□ -2.13
SNC1YAL030W PRS2P38620 318 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W DED81P38707 554 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W TCD1P38756 429 aa1.76□□□□□ -2.13
SNC1YAL030W BIG1P38813 335 aa1.76□□□□□ -2.13
SNC1YAL030W RTR1P40084 226 aaPredicted RBP1.76□□□□□ -2.13
SNC1YAL030W DSN1P40568 576 aa1.76□□□□□ -2.13
SNC1YAL030W OTU1P43558 301 aa1.76□□□□□ -2.13
SNC1YAL030W LIF1P53150 421 aa1.76□□□□□ -2.13
SNC1YAL030W YNL040WP53960 456 aaPredicted RBP1.76□□□□□ -2.13
SNC1YAL030W RMI1Q02685 241 aa1.76□□□□□ -2.13
SNC1YAL030W ADD37Q03233 198 aa1.76□□□□□ -2.13
SNC1YAL030W VHS1Q03785 461 aa1.76□□□□□ -2.13
SNC1YAL030W INP2Q03824 705 aa1.76□□□□□ -2.13
SNC1YAL030W SEC13Q04491 297 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W TAF9Q05027 157 aa1.76□□□□□ -2.13
SNC1YAL030W PAL1Q05518 499 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W DPP1Q05521 289 aa1.76□□□□□ -2.13
SNC1YAL030W LIP2Q06005 328 aa1.76□□□□□ -2.13
SNC1YAL030W SFH1Q06168 426 aa1.76□□□□□ -2.13
SNC1YAL030W PAM18Q07914 168 aa1.76□□□□□ -2.13
SNC1YAL030W MIM1Q08176 113 aa1.76□□□□□ -2.13
SNC1YAL030W YOR376WQ08900 122 aa1.76□□□□□ -2.13
SNC1YAL030W SGT2Q12118 346 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W MSH5Q12175 901 aa1.76□□□□□ -2.13
SNC1YAL030W YDR018CQ12185 396 aa1.76□□□□□ -2.13
SNC1YAL030W YOR114WQ12219 294 aa1.76□□□□□ -2.13
SNC1YAL030W SME1Q12330 94 aaPredicted RBP1.76□□□□□ -2.13
SNC1YAL030W SNF8Q12483 233 aa1.76□□□□□ -2.13
SNC1YAL030W RPL21BQ12672 160 aaKnown RBP1.76□□□□□ -2.13
SNC1YAL030W FOL3Q12676 427 aaPredicted RBP1.76□□□□□ -2.13
SNC1YAL030W YOS9Q99220 542 aa1.76□□□□□ -2.13
SNC1YAL030W STH1P32597 1359 aa1.75□□□□□ -2.13
SNC1YAL030W YAL064W-BO13512 126 aa1.75□□□□□ -2.13
SNC1YAL030W TDH2P00358 332 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W RPP0P05317 312 aaKnown RBP1.75□□□□□ -2.13
SNC1YAL030W RPS3P05750 240 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms