RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 XRCC6P12956 609 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG1-217ENST00000569764 SCG2P13521 617 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 MUTP22033 750 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TFAP4Q01664 338 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 RASGRF1Q13972 1273 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 NOLC1Q14978 699 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG1-217ENST00000569764 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 HSP90AA5PQ58FG0 334 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 KIAA1841Q6NSI8 718 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 CCDC117Q8IWD4 279 aaPredicted RBP7.2□□□□□ -1.26
SMG1-217ENST00000569764 FAM26EQ8N5C1 309 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 RUFY1Q96T51 708 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 PHACTR1Q9C0D0 580 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ALG2Q9H553 416 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ANKEF1Q9NU02 776 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 CHD4Q14839 1912 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 ZNF532Q9HCE3 1301 aa7.2□□□□□ -1.26
SMG1-217ENST00000569764 TMCC2O75069 709 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 RGS20O76081 388 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 STAMBPO95630 424 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 ATF4P18848 351 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 MCM5P33992 734 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 GABREP78334 506 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 HIC1Q14526 733 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 IER5Q5VY09 327 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 RNF207Q6ZRF8 634 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 RAB11FIP4Q86YS3 637 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 URGCPQ8TCY9 931 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 ZKSCAN4Q969J2 545 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 CLIP3Q96DZ5 547 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CNDP2Q96KP4 475 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 CFHR5Q9BXR6 569 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 TM6SF1Q9BZW5 370 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 LAMP5Q9UJQ1 280 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 MYH13Q9UKX3 1938 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 H3BQV1 296 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CTDNEP1O95476 244 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 MYCLP12524 364 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 FOSL2P15408 326 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 TUFMP49411 452 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 SYDE2Q5VT97 1194 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 TXNRD3Q86VQ6 643 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 INTS4Q96HW7 963 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 PLEKHG4BQ96PX9 1271 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 VAT1LQ9HCJ6 419 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CACNA1SQ13698 1873 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 H0YCG3 227 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 SEPT4O43236 478 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CD4P01730 458 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 PBLDP30039 288 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 APBA1Q02410 837 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 MOGSQ13724 837 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 IKBKEQ14164 716 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 ITPRIPL1Q6GPH6 555 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 NUDT18Q6ZVK8 323 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CEP295NLQ96MC4 621 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 HERPUD2Q9BSE4 406 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 BRD9Q9H8M2 597 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 DDX18Q9NVP1 670 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 BAZ2AQ9UIF9 1905 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 TREHO43280 583 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 CEP104O60308 925 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 GJB2P29033 226 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 ATN1P54259 1190 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 TFDP1Q14186 410 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 PPA1Q15181 289 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 TIGD5Q53EQ6 642 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 ARHGEF18Q6ZSZ5 1173 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 Q6ZUG5 572 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 GALNT5Q7Z7M9 940 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 USP37Q86T82 979 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 WHAMMQ8TF30 809 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 C1QTNF1Q9BXJ1 281 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 SPATC1LQ9H0A9 340 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 NSRP1Q9H0G5 558 aaKnown RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 TTC12Q9H892 705 aaPredicted RBP7.19□□□□□ -1.26
SMG1-217ENST00000569764 CYP46A1Q9Y6A2 500 aa7.19□□□□□ -1.26
SMG1-217ENST00000569764 SFI1A8K8P3 1242 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 E7EWF7 191 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 H3BRJ5 948 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 TULP2O00295 520 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 P4HA2O15460 535 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ASMTLO95671 621 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 PDHA1P08559 390 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 RAD52P43351 418 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 POLD2P49005 469 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 CACNB3P54284 484 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 HSP90AA4PQ58FG1 418 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 TATDN1Q6P1N9 297 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 LRSAM1Q6UWE0 723 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 MOGAT1Q96PD6 335 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 NCOA5Q9HCD5 579 aaKnown RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 SPATS2LQ9NUQ6 558 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms