RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
UBFD1-205ENST00000566136 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
UBFD1-205ENST00000566136 SPRED3Q2MJR0 410 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 Q8NFD4 153 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 ACSF2Q96CM8 615 aaPredicted RBP11.75□□□□□ -0.53
UBFD1-205ENST00000566136 TRAV20A0A0B4J274 112 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
UBFD1-205ENST00000566136 FGFR1P11362 822 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
UBFD1-205ENST00000566136 SV2BQ7L1I2 683 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 OR2W6PQ8NHA6 318 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 MTRRQ9UBK8 725 aa11.75□□□□□ -0.53
UBFD1-205ENST00000566136 PSEN2P49810 448 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 ATXN1P54253 815 aaKnown RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 DRG2P55039 364 aaKnown RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 KLHDC7AQ5VTJ3 777 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 SLC44A2Q8IWA5 706 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 KBTBD3Q8NAB2 608 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 BTN2A2Q8WVV5 523 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 NECAB3Q96P71 396 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 PAG1Q9NWQ8 432 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 TM4SF1P30408 202 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 MAP7Q14244 749 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 ZKSCAN8Q15776 578 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 NANOS1Q8WY41 292 aaKnown RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-205ENST00000566136 LRRC2Q9BYS8 371 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 MAGEH1Q9H213 219 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 HAUS2Q9NVX0 235 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 PCDHA9Q9Y5H5 950 aa11.74□□□□□ -0.53
UBFD1-205ENST00000566136 TCRBV16S1A1N1A0A5B0 115 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 STXBP3O00186 592 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
UBFD1-205ENST00000566136 ITGAVP06756 1048 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 CYP21A2P08686 494 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 PABPC1P11940 636 aaKnown RBP11.73□□□□□ -0.53
UBFD1-205ENST00000566136 KCNA3P22001 575 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 CTSSP25774 331 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 DSG1Q02413 1049 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 LRRC32Q14392 662 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 ZNF362Q5T0B9 420 aaPredicted RBP11.73□□□□□ -0.53
UBFD1-205ENST00000566136 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
UBFD1-205ENST00000566136 CCDC170Q8IYT3 715 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 SLC9A7Q96T83 725 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 AARSD1Q9BTE6 412 aaKnown RBP11.73□□□□□ -0.53
UBFD1-205ENST00000566136 MENTQ9BUN1 341 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 KCTD10Q9H3F6 313 aa11.73□□□□□ -0.53
UBFD1-205ENST00000566136 DKC1O60832 514 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 KIF20AO95235 890 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 GUCA1CO95843 209 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 GPTP24298 496 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 IRGCQ6NXR0 463 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 ZNF511Q8NB15 262 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 IPMKQ8NFU5 416 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 FAM193BQ96PV7 902 aaPredicted RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 OLA1Q9NTK5 396 aaKnown RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 PGPEP1LA6NFU8 196 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 B4DLN1 442 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 RBAK-RBAKDNI3L0D1 243 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 CRTAMO95727 393 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 STARD3NLO95772 234 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 TP53P04637 393 aaPredicted RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 ALDH2P05091 517 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 JUPP14923 745 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 ADORA1P30542 326 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 ADSLP30566 484 aaPredicted RBP11.72□□□□□ -0.53
UBFD1-205ENST00000566136 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 MBTPS1Q14703 1052 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 NFIXQ14938 502 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 KDELC2Q7Z4H8 507 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 TCF12Q99081 682 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms