RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 TSPY1Q01534 308 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.38e-10■■□□□ 12.5
TPR-201ENST00000367478 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 CDKL3Q8IVW4 592 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 MCPH1Q8NEM0 835 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 GGCXP38435 758 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 UGP2Q16851 508 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 KLHL31Q9H511 634 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 E7ENQ6 273 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 KLHL2O95198 593 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 KYAT1Q16773 422 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 SLC44A4Q53GD3 710 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 NDUFA13Q9P0J0 144 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 MFAP3LO75121 409 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 PALMO75781 387 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 SH3KBP1Q96B97 665 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 NLRP4Q96MN2 994 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 OLFM1Q99784 485 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 FAM167AQ96KS9 214 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 PI4K2BG5E9Z4 385 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 TYK2P29597 1187 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 ROR1Q01973 937 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 DSTYKQ6XUX3 929 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 RC3H1Q5TC82 1133 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 MKL2Q9ULH7 1088 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 NFIBO00712 420 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 CIAO1O76071 339 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 GPS1Q13098 491 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
TPR-201ENST00000367478 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 BRD8Q9H0E9 1235 aa13.16□□□□□ -0.3
TPR-201ENST00000367478 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 KCNQ4P56696 695 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 ADRM1Q16186 407 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 CDO1Q16878 200 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 PKN3Q6P5Z2 889 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 CCND1P24385 295 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 LZTS1Q9Y250 596 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 A2MP01023 1474 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 USE1Q9NZ43 259 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.3
TPR-201ENST00000367478 KCNA2P16389 499 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 NUP107P57740 925 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 FOXP3Q9BZS1 431 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 DHX36Q9H2U1 1008 aaKnown RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 TBCKQ8TEA7 893 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 PLCG1P19174 1290 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 CD58P19256 250 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 ANGPT1Q15389 498 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 EFL1Q7Z2Z2 1120 aaKnown RBP13.15□□□□□ -0.3
TPR-201ENST00000367478 FGD2Q7Z6J4 655 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 SDR42E1Q8WUS8 393 aa13.15□□□□□ -0.3
TPR-201ENST00000367478 A0A0D9SFI3 127 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 CLIC2O15247 247 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 CAPZA2P47755 286 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 SP110Q9HB58 689 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 ABHD10Q9NUJ1 306 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 LEMD3Q9Y2U8 911 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 PRKCQQ04759 706 aa13.14□□□□□ -0.31
TPR-201ENST00000367478 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms