RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 DNAJC12Q9UKB3 198 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 POTEB3A0JP26 581 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 POTECB2RU33 542 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 ENDOD1O94919 500 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SLC16A1P53985 500 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 POTEBQ6S5H4 581 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 NUP85Q9BW27 656 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 HOXC10Q9NYD6 342 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 E9PMD0 336 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 CHRNA3P32297 505 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 HMGCS2P54868 508 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 BTKQ06187 659 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GPS1Q13098 491 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PDCLQ13371 301 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ALFQ53S48 1182 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PIGBQ92521 554 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PAGE5Q96GU1 130 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 TRIM15Q9C019 465 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 RERGLQ9H628 205 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 RNF146Q9NTX7 359 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 HSPBP1Q9NZL4 362 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GGT7Q9UJ14 662 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GTF2A1LQ9UNN4 478 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ST8SIA6P61647 398 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GTF2H3Q13889 308 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 EFTUD2Q15029 972 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 LRRC14Q15048 493 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GRAMD4Q6IC98 578 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 SFR1Q86XK3 245 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 OSBP2Q969R2 916 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PGBD4Q96DM1 585 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 FMO2Q99518 471 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 UPF3AQ9H1J1 476 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 CHCHD3Q9NX63 227 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ADAMTS1Q9UHI8 967 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 AURKCQ9UQB9 309 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 MYO1GB0I1T2 1018 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 TLR2O60603 784 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 TADA3O75528 432 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 LUC7L3O95232 432 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 C10orf53Q8N6V4 93 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 TEX12Q9BXU0 123 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 SNX24Q9Y343 169 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 SCINQ9Y6U3 715 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 NCK2O43639 380 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 MMP1P03956 469 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 CCHCR1Q8TD31 782 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 EIF2AQ9BY44 585 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ZNF263O14978 683 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ALDH1A1P00352 501 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PRDX5P30044 214 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 NNTQ13423 1086 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GRAPQ13588 217 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 GRAPLQ8TC17 118 aaPredicted RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PPP1R14AQ96A00 147 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 ABCC12Q96J65 1359 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 TWF1Q12792 350 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 NUGGCQ68CJ6 796 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 FBXO41Q8TF61 875 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 FAM118BQ9BPY3 351 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 MAP3K20Q9NYL2 800 aaKnown RBP10.61□□□□□ -0.71
COL11A1-201ENST00000353414 AOX1Q06278 1338 aa10.61□□□□□ -0.71
COL11A1-201ENST00000353414 RASGRF2O14827 1237 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 DYNC1LI2O43237 492 aaPredicted RBP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 IMPDH2P12268 514 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 MAPK9P45984 424 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 WASHC5Q12768 1159 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 NRBF2Q96F24 287 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 VPS39Q96JC1 886 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 APOA4P06727 396 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 AARSP49588 968 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 PRELPP51888 382 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 KRT31Q15323 416 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 CACUL1Q86Y37 369 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 TMEM143Q96AN5 459 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 CLMNQ96JQ2 1002 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 IL1RL2Q9HB29 575 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 UBXN8O00124 270 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 ORC4O43929 436 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 RALAP11233 206 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 SLC8A1P32418 973 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 ANKS3Q6ZW76 656 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 GJD4Q96KN9 370 aaPredicted RBP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 APOL5Q9BWW9 433 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 TRIM55Q9BYV6 548 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 FBXO2Q9UK22 296 aaPredicted RBP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 RASGRF1Q13972 1273 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 TADA2BQ86TJ2 420 aa10.6□□□□□ -0.71
COL11A1-201ENST00000353414 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
COL11A1-201ENST00000353414 FOXP1Q9H334 677 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms