RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 VSIG1Q86XK7 387 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 NOA1Q8NC60 698 aaKnown RBP18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 BLOC1S4Q9NUP1 217 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 KCND2Q9NZV8 630 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 ATRNO75882 1429 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 C6orf163Q5TEZ5 329 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 CCDC125Q86Z20 511 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 LRRC71Q8N4P6 559 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 RUNDC3BQ96NL0 473 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 LACRTQ9GZZ8 138 aa18.27■□□□□ 0.52
PPP3CA-201ENST00000323055 MYL3P08590 195 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 PSMA2P25787 234 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 CIITAP33076 1130 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 GPC3P51654 580 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 RSPH3Q86UC2 560 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 CDR2LQ86X02 465 aaPredicted RBP18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 KCTD6Q8NC69 237 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 WHAMMQ8TF30 809 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 PPP1R9AQ9ULJ8 1098 aa18.27■□□□□ 0.51
PPP3CA-201ENST00000323055 EMC2Q15006 297 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 PI4K2AQ9BTU6 479 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 AMACRQ9UHK6 382 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 NOVA2Q9UNW9 492 aaKnown RBP18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 A0A087X0T9 212 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 ACSL3O95573 720 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 FAM228BP0C875 321 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 BASP1P80723 227 aaKnown RBP18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 CCDC97Q96F63 343 aaPredicted RBP18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 TARS2Q9BW92 718 aaKnown RBP18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 ZBTB39O15060 712 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 EPC2Q52LR7 807 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 FAM83AQ86UY5 434 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 P3H4Q92791 437 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 RASSF4Q9H2L5 321 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 NOC2LQ9Y3T9 749 aaKnown RBP18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 LMNB2Q03252 620 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 CFAP157Q5JU67 520 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 LGSNQ5TDP6 509 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 BBOF1Q8ND07 529 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 ZNF384Q8TF68 577 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 SCINQ9Y6U3 715 aa18.26■□□□□ 0.51
PPP3CA-201ENST00000323055 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 GBP1P32455 592 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 MAN1A1P33908 653 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 IL17AQ16552 155 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SMC6Q96SB8 1091 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 ADAM21Q9UKJ8 722 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 AKAP3O75969 853 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 ACTR2P61160 394 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 DUOXA2Q1HG44 320 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 PNMA8AQ86V59 439 aaPredicted RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 FAM193BQ96PV7 902 aaPredicted RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 LRRC4Q9HBW1 653 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 PCSK1NQ9UHG2 260 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 PRKCBP05771 671 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SH3RF1Q7Z6J0 888 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 GLIS3Q8NEA6 775 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.25■□□□□ 0.511e-6■□□□□ 10.5
PPP3CA-201ENST00000323055 CBWD1Q9BRT8 395 aa18.25■□□□□ 0.51
PPP3CA-201ENST00000323055 SYNGAP1Q96PV0 1343 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 EIF3DO15371 548 aaKnown RBP eCLIP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 TGFB2P61812 414 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 WDR72Q3MJ13 1102 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 TTC31Q49AM3 519 aaPredicted RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 TWF2Q6IBS0 349 aaKnown RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 CCNYQ8ND76 341 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 SLC35G2Q8TBE7 412 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 HSPH1Q92598 858 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 DUSP9Q99956 384 aaKnown RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 GLIS2Q9BZE0 524 aaPredicted RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 INTS9Q9NV88 658 aaKnown RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 PRPSAP2O60256 369 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 GGCXP38435 758 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 PPP6R3Q5H9R7 873 aaPredicted RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 FYB2Q5VWT5 728 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 CCDC110Q8TBZ0 833 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 EHD2Q9NZN4 543 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 GLE1Q53GS7 698 aaKnown RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 EML1O00423 815 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 SLC26A4O43511 780 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 ZSCAN20P17040 1043 aaPredicted RBP18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 PHBP35232 272 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
PPP3CA-201ENST00000323055 TMEM150BA6NC51 233 aa18.23■□□□□ 0.51
PPP3CA-201ENST00000323055 MCF2LO15068 1137 aa18.23■□□□□ 0.51
PPP3CA-201ENST00000323055 STAMBPO95630 424 aa18.23■□□□□ 0.51
PPP3CA-201ENST00000323055 FGRP09769 529 aa18.23■□□□□ 0.51
PPP3CA-201ENST00000323055 RFX1P22670 979 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms