RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cyp11b1Q3TG86 501 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Spout1Q3UHX9 385 aaKnown RBP13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 FaxcQ3UMF9 409 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ccdc51Q3URS9 406 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nlrp14Q6B966 993 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Dzip3Q7TPV2 1204 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Psmd5Q8BJY1 504 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Inpp5fQ8CDA1 1132 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 MyripQ8K3I4 856 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Epb41l3Q9WV92 929 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rps6ka4Q9Z2B9 773 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Lrp6O88572 1613 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nwd2Q6P5U7 1742 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rad51bO35719 350 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 ZfxP17012 799 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Col6a1Q04857 1025 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Vav2Q60992 868 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Sin3bQ62141 1098 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ms4a5Q810P8 197 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 IscuQ9D7P6 168 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Stk4Q9JI11 487 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm11985A0A1B0GS61 206 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Card9A2AIV8 536 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Tlr8P58682 1032 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 AmphQ7TQF7 686 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Clec4gQ8BNX1 294 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Lonp1Q8CGK3 949 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 MypopQ8R4U1 393 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Dtnbp1Q91WZ8 352 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fam111aQ9D2L9 613 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rfpl4bJ3QPR6 266 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 DffaO54786 331 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Siah1aP61092 282 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 PhbP67778 272 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cdca2Q14B71 982 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 C2cd5Q7TPS5 1016 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Trim47Q8C0E3 641 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Dusp19Q8K4T5 220 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ddx39aQ8VDW0 427 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Tmco4Q91WU4 631 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Aox3G3X982 1335 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Clrn2B2RVW2 232 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Vps33bP59016 617 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 GabpaQ00422 454 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kmt5aQ2YDW7 349 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Dab2ipQ3UHC7 1189 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cyp26b1Q811W2 512 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cabs1Q8C633 391 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cdk17Q8K0D0 523 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Akr1c14Q91WT7 323 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Dnajb7Q9QYI8 312 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Pck1Q9Z2V4 622 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gimd1E9PW74 217 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm44503E9PYU5 387 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Taf4E9QAP7 1042 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 LdhbP16125 334 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Hspa9P38647 679 aaKnown RBP13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Wfs1P56695 890 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kcnma1Q08460 1209 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Odr4Q4PJX1 447 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Tas2r134Q7TQB0 298 aa13.61□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm8298J3QPI0 401 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nrg3O35181 713 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kcnu1O54982 1121 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Klra1P20937 262 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Tnni3P48787 211 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 TraddQ3U0V2 310 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Atp2b4Q6Q477 1205 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ckap2lQ7TS74 745 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Lyve1Q8BHC0 318 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Thap3Q8BJ25 218 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Btbd6Q8K2J9 488 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Apol8A2VDH7 339 aaKnown RBP13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm6588E9Q3K0 461 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 AurkbO70126 345 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rtkn2Q14B46 604 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Chordc1Q9D1P4 331 aaKnown RBP13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cse1lQ9ERK4 971 aaKnown RBP13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm29133A0A1B0GT72 266 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ttll10A4Q9F3 704 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ccnyl1D3YUJ3 367 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fam47eD3YWC7 402 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Serpini1O35684 410 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Sema6bO54951 886 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Prr7Q3V0I2 269 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ifnl2Q4VK74 193 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 DeptorQ570Y9 409 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Clca4aQ6Q473 924 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Chmp2bQ8BJF9 213 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Abcf3Q8K268 709 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Defb15Q8R2I5 79 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Pomgnt1Q91X88 660 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nsmce3Q9CPR8 279 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mageb16Q9CWV4 363 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nde1Q9CZA6 344 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Hao1Q9WU19 370 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Arap2Q8BZ05 1703 aa13.6□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Shank3Q4ACU6 1730 aa13.59□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Npy5rO70342 466 aa13.59□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Aff1O88573 1216 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms