RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	CCT7	P42943	550 aa	Known RBP	3.76	□□□□□ -1.81
SPN1	YPR133C	PTR3	P43606	678 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	MSY1	P48527	492 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	RCF2	P53721	224 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	IDP3	P53982	420 aa	Known RBP	3.76	□□□□□ -1.81
SPN1	YPR133C	IRC15	Q02733	499 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	ECM11	Q04110	302 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	YDR124W	Q04608	324 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	BUR2	Q05949	395 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	VPS74	Q06385	345 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	RAF1	Q06891	181 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	YLR053C	Q12026	108 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	LYS21	Q12122	440 aa	Known RBP	3.76	□□□□□ -1.81
SPN1	YPR133C	ATG34	Q12292	412 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	GEP5	Q12393	293 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	ISN1	Q99312	450 aa		3.76	□□□□□ -1.81
SPN1	YPR133C	RNA1	P11745	407 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	MDH2	P22133	377 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	YCR051W	P25631	222 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	SPP381	P38282	291 aa	Predicted RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	NSG1	P38837	291 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	SMX2	P40204	77 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	ATF1	P40353	525 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	LYS12	P40495	371 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	MDE1	P47095	244 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	NAS6	P50086	228 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	YGR054W	P53235	642 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	GOR1	P53839	350 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	RHO5	P53879	331 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	SWP1	Q02795	286 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	RNH1	Q04740	348 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	FMP40	Q08968	688 aa	Predicted RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	SWT1	Q12104	458 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	USV1	Q12132	391 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	BSC1	Q12140	328 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	RPN5	Q12250	445 aa	Known RBP	3.75	□□□□□ -1.81
SPN1	YPR133C	FRE6	Q12473	712 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	SPO24	Q3E752	67 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	YPT6	Q99260	215 aa		3.75	□□□□□ -1.81
SPN1	YPR133C	MDN1	Q12019	4910 aa	Known RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	CCW14	O13547	238 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	CDC8	P00572	216 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	STF1	P01098	86 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	YML003W	P0CF16	290 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	SEC17	P32602	292 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	LOS1	P33418	1100 aa	Predicted RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	YOR062C	P36025	268 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	CAF4	P36130	643 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	MRPL39	P36533	70 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	SCO2	P38072	301 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	MTC6	P38849	526 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	SHO1	P40073	367 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	YNL208W	P40159	199 aa	Known RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	PRE6	P40303	254 aa	Known RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	GDS1	P41913	522 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	GTO1	P48239	356 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	LSG1	P53145	640 aa	Known RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	NOP19	P53317	196 aa	Predicted RBP	3.74	□□□□□ -1.81
SPN1	YPR133C	INP1	Q03694	420 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	GTB1	Q04924	702 aa		3.74	□□□□□ -1.81
SPN1	YPR133C	TFS1	P14306	219 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	KSS1	P14681	368 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	UTR1	P21373	530 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	CPR2	P23285	205 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	MSS1	P32559	526 aa	Predicted RBP	3.73	□□□□□ -1.81
SPN1	YPR133C	SSE1	P32589	693 aa	Known RBP	3.73	□□□□□ -1.81
SPN1	YPR133C	PPZ2	P33329	710 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	SWH1	P35845	1188 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	CUE2	P36075	443 aa	Known RBP	3.73	□□□□□ -1.81
SPN1	YPR133C	FAA2	P39518	744 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
SPN1	YPR133C	IDP2	P41939	412 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	YFR054C	P43622	192 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	FAR3	P46671	204 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	MAL13	P53338	473 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	EOS1	P53938	366 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	ASI1	P54074	624 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	YPL039W	Q03080	316 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	SNX41	Q04053	625 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	MRPL1	Q04599	285 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	HNT3	Q08702	217 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	SLF1	Q12034	447 aa	Known RBP	3.73	□□□□□ -1.81
SPN1	YPR133C	YBR255C-A	Q3E776	120 aa		3.73	□□□□□ -1.81
SPN1	YPR133C	YBR085C-A	O43137	85 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	RPL15A	P05748	204 aa	Known RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	DBR1	P24309	405 aa	Known RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	EHD3	P28817	500 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	SEC31	P38968	1273 aa	Known RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	CTK2	P46962	323 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	URB2	P47108	1174 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	LIA1	P47120	325 aa	Known RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	MNT4	P53745	580 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	RPL15B	P54780	204 aa	Predicted RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	APM1	Q00776	475 aa	Predicted RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	RIM13	Q03792	727 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	COQ11	Q05892	277 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	STE23	Q06010	1027 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	YLR036C	Q07986	203 aa		3.72	□□□□□ -1.81
SPN1	YPR133C	GPN2	Q08726	347 aa	Predicted RBP	3.72	□□□□□ -1.81
SPN1	YPR133C	YDL180W	Q12301	547 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms