RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C YMR252CQ04814 134 aa3.12□□□□□ -1.91
RPA135YPR010C BNA5Q05979 453 aa3.12□□□□□ -1.91
RPA135YPR010C DAP1Q12091 152 aa3.12□□□□□ -1.91
RPA135YPR010C ACF2Q12168 779 aa3.12□□□□□ -1.91
RPA135YPR010C RIB3Q99258 208 aa3.12□□□□□ -1.91
RPA135YPR010C ADK1P07170 222 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C SGA1P08019 549 aa3.11□□□□□ -1.91
RPA135YPR010C STE18P18852 110 aa3.11□□□□□ -1.91
RPA135YPR010C SLM5P25345 492 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C YCR100CP25606 316 aa3.11□□□□□ -1.91
RPA135YPR010C BUB3P26449 341 aa3.11□□□□□ -1.91
RPA135YPR010C IDH1P28834 360 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
RPA135YPR010C PRE2P30656 287 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C DCG1P32460 244 aa3.11□□□□□ -1.91
RPA135YPR010C FMP46P36141 133 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C SCO2P38072 301 aa3.11□□□□□ -1.91
RPA135YPR010C LRO1P40345 661 aa3.11□□□□□ -1.91
RPA135YPR010C PXR1P53335 271 aaPredicted RBP3.11□□□□□ -1.91
RPA135YPR010C DML1Q03652 475 aa3.11□□□□□ -1.91
RPA135YPR010C CDA2Q06703 312 aa3.11□□□□□ -1.91
RPA135YPR010C HRT1Q08273 121 aa3.11□□□□□ -1.91
RPA135YPR010C RRG7Q08774 242 aaPredicted RBP3.11□□□□□ -1.91
RPA135YPR010C LEU9Q12166 604 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C MDM32Q12171 622 aa3.11□□□□□ -1.91
RPA135YPR010C RDI1Q12434 202 aa3.11□□□□□ -1.91
RPA135YPR010C PCL9Q12477 304 aa3.11□□□□□ -1.91
RPA135YPR010C SLH1P53327 1967 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C YEL009C-AA0A023PZF2 135 aa3.11□□□□□ -1.91
RPA135YPR010C GCN4P03069 281 aa3.11□□□□□ -1.91
RPA135YPR010C DAT1P13483 248 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C RPB5P20434 215 aa3.11□□□□□ -1.91
RPA135YPR010C ERV1P27882 189 aa3.11□□□□□ -1.91
RPA135YPR010C MRPL6P32904 214 aa3.11□□□□□ -1.91
RPA135YPR010C SHE2P36068 246 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
RPA135YPR010C YHR180WP38868 163 aa3.11□□□□□ -1.91
RPA135YPR010C YJL016WP47072 561 aa3.11□□□□□ -1.91
RPA135YPR010C IMD3P50095 523 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C SUN4P53616 420 aa3.11□□□□□ -1.91
RPA135YPR010C SWS2P53937 143 aa3.11□□□□□ -1.91
RPA135YPR010C YLR283WQ05867 314 aa3.11□□□□□ -1.91
RPA135YPR010C NMA1Q06178 401 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C SFG1Q12507 346 aa3.11□□□□□ -1.91
RPA135YPR010C YSF3P0C074 85 aaPredicted RBP3.11□□□□□ -1.91
RPA135YPR010C TY1A-LR4P0C2I8 440 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C TY1A-DR6P0CX70 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-ER1P0CX71 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-LR2P0CX72 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-PLP0CX73 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-JR1P0CX74 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-LR3P0CX75 440 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-ML2P0CX76 440 aa3.11□□□□□ -1.91
RPA135YPR010C ARF1P11076 181 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C RNA14P25298 677 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C PRE4P30657 266 aa3.11□□□□□ -1.91
RPA135YPR010C MRPL36P36531 177 aa3.11□□□□□ -1.91
RPA135YPR010C RIB1P38066 345 aa3.11□□□□□ -1.91
RPA135YPR010C YPK3P38070 525 aa3.11□□□□□ -1.91
RPA135YPR010C YBR063CP38083 404 aa3.11□□□□□ -1.91
RPA135YPR010C GPX2P38143 162 aa3.11□□□□□ -1.91
RPA135YPR010C SHE1P38200 338 aa3.11□□□□□ -1.91
RPA135YPR010C SHO1P40073 367 aa3.11□□□□□ -1.91
RPA135YPR010C MID1P41821 548 aa3.11□□□□□ -1.91
RPA135YPR010C SPG5P42933 373 aa3.11□□□□□ -1.91
RPA135YPR010C BAT2P47176 376 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C YMR087WQ04299 284 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-GR1Q12085 440 aa3.11□□□□□ -1.91
RPA135YPR010C LYS21Q12122 440 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C YKL033W-AQ86ZR7 236 aa3.11□□□□□ -1.91
RPA135YPR010C TY1A-OLQ92392 440 aaKnown RBP3.11□□□□□ -1.91
RPA135YPR010C PEP4P07267 405 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C RPL1AP0CX43 217 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C RPL1BP0CX44 217 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C OAC1P32332 324 aa3.1□□□□□ -1.91
RPA135YPR010C MTC7P32633 139 aa3.1□□□□□ -1.91
RPA135YPR010C CDC13P32797 924 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C JEN1P36035 616 aa3.1□□□□□ -1.91
RPA135YPR010C NVJ1P38881 321 aa3.1□□□□□ -1.91
RPA135YPR010C YJL193WP39542 402 aa3.1□□□□□ -1.91
RPA135YPR010C VRG4P40107 337 aa3.1□□□□□ -1.91
RPA135YPR010C VNX1P42839 908 aa3.1□□□□□ -1.91
RPA135YPR010C STB1P42845 420 aa3.1□□□□□ -1.91
RPA135YPR010C CHA4P43634 648 aa3.1□□□□□ -1.91
RPA135YPR010C BIT61P47041 543 aa3.1□□□□□ -1.91
RPA135YPR010C MPC1P53157 130 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C JAC1P53193 184 aa3.1□□□□□ -1.91
RPA135YPR010C MRPL50P53724 139 aa3.1□□□□□ -1.91
RPA135YPR010C GIM3P53900 129 aa3.1□□□□□ -1.91
RPA135YPR010C ASR1Q06834 288 aa3.1□□□□□ -1.91
RPA135YPR010C YLR031WQ07978 186 aa3.1□□□□□ -1.91
RPA135YPR010C BTS1Q12051 335 aa3.1□□□□□ -1.91
RPA135YPR010C YBR298C-AQ8TGK4 73 aa3.1□□□□□ -1.91
RPA135YPR010C YGL041W-AP0C5N3 154 aa3.1□□□□□ -1.91
RPA135YPR010C FPR1P20081 114 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C LOT5P34234 306 aa3.1□□□□□ -1.91
RPA135YPR010C SNU114P36048 1008 aaKnown RBP3.1□□□□□ -1.91
RPA135YPR010C YHR210CP38893 341 aa3.1□□□□□ -1.91
RPA135YPR010C HOC1P47124 396 aa3.1□□□□□ -1.91
RPA135YPR010C YGR067CP53243 804 aa3.1□□□□□ -1.91
RPA135YPR010C TPP1Q03796 238 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms