RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W SPS100P13130 326 aa2.14□□□□□ -2.07
PEP12YOR036W CMK2P22517 447 aa2.14□□□□□ -2.07
PEP12YOR036W URA10P30402 227 aa2.14□□□□□ -2.07
PEP12YOR036W RPT5P33297 434 aaKnown RBP2.14□□□□□ -2.07
PEP12YOR036W CBF5P33322 483 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
PEP12YOR036W KTI12P34253 313 aaKnown RBP2.14□□□□□ -2.07
PEP12YOR036W YUH1P35127 236 aa2.14□□□□□ -2.07
PEP12YOR036W RPC37P36121 282 aa2.14□□□□□ -2.07
PEP12YOR036W MRPL37P36532 105 aa2.14□□□□□ -2.07
PEP12YOR036W SOL2P37262 315 aa2.14□□□□□ -2.07
PEP12YOR036W SMC2P38989 1170 aaKnown RBP2.14□□□□□ -2.07
PEP12YOR036W PEX22P39718 180 aa2.14□□□□□ -2.07
PEP12YOR036W GDS1P41913 522 aa2.14□□□□□ -2.07
PEP12YOR036W UBC13P52490 153 aa2.14□□□□□ -2.07
PEP12YOR036W CDH1P53197 566 aa2.14□□□□□ -2.07
PEP12YOR036W TPC1P53257 314 aa2.14□□□□□ -2.07
PEP12YOR036W LSB1P53281 241 aa2.14□□□□□ -2.07
PEP12YOR036W YGR266WP53326 701 aa2.14□□□□□ -2.07
PEP12YOR036W MPP6P53725 186 aaPredicted RBP2.14□□□□□ -2.07
PEP12YOR036W SED5Q01590 340 aa2.14□□□□□ -2.07
PEP12YOR036W RRN5Q02983 363 aa2.14□□□□□ -2.07
PEP12YOR036W MHR1Q06630 226 aa2.14□□□□□ -2.07
PEP12YOR036W YLL007CQ07799 665 aa2.14□□□□□ -2.07
PEP12YOR036W YOR376WQ08900 122 aa2.14□□□□□ -2.07
PEP12YOR036W TDH1P00360 332 aaKnown RBP2.13□□□□□ -2.07
PEP12YOR036W ICL1P28240 557 aaPredicted RBP2.13□□□□□ -2.07
PEP12YOR036W YKL071WP36086 256 aa2.13□□□□□ -2.07
PEP12YOR036W EFM1P38732 585 aa2.13□□□□□ -2.07
PEP12YOR036W SHQ1P40486 507 aaPredicted RBP2.13□□□□□ -2.07
PEP12YOR036W IGD1P43598 195 aa2.13□□□□□ -2.07
PEP12YOR036W KAP114P53067 1004 aa2.13□□□□□ -2.07
PEP12YOR036W YGL039WP53183 348 aaKnown RBP2.13□□□□□ -2.07
PEP12YOR036W SWC4P53201 476 aa2.13□□□□□ -2.07
PEP12YOR036W RNH201P53942 307 aa2.13□□□□□ -2.07
PEP12YOR036W SPP2Q02521 185 aa2.13□□□□□ -2.07
PEP12YOR036W ATC1Q04005 294 aa2.13□□□□□ -2.07
PEP12YOR036W LIP2Q06005 328 aa2.13□□□□□ -2.07
PEP12YOR036W GMC2Q06201 188 aa2.13□□□□□ -2.07
PEP12YOR036W UTP23Q12339 254 aaKnown RBP2.13□□□□□ -2.07
PEP12YOR036W COX2P00410 251 aa2.12□□□□□ -2.07
PEP12YOR036W COX4P04037 155 aa2.12□□□□□ -2.07
PEP12YOR036W RPL16BP26785 198 aaKnown RBP2.12□□□□□ -2.07
PEP12YOR036W YKL187CP34231 750 aa2.12□□□□□ -2.07
PEP12YOR036W COY1P34237 679 aa2.12□□□□□ -2.07
PEP12YOR036W YKL063CP35725 167 aa2.12□□□□□ -2.07
PEP12YOR036W YBR241CP38142 488 aa2.12□□□□□ -2.07
PEP12YOR036W YPC1P38298 316 aa2.12□□□□□ -2.07
PEP12YOR036W PET8P38921 284 aa2.12□□□□□ -2.07
PEP12YOR036W YAR1P46683 200 aa2.12□□□□□ -2.07
PEP12YOR036W MRX5P47007 382 aa2.12□□□□□ -2.07
PEP12YOR036W PGU1P47180 361 aa2.12□□□□□ -2.07
PEP12YOR036W TIS11P47977 285 aa2.12□□□□□ -2.07
PEP12YOR036W YLR152CP54072 576 aa2.12□□□□□ -2.07
PEP12YOR036W TSA2Q04120 196 aa2.12□□□□□ -2.07
PEP12YOR036W PAL1Q05518 499 aaKnown RBP2.12□□□□□ -2.07
PEP12YOR036W YLR446WQ06204 433 aa2.12□□□□□ -2.07
PEP12YOR036W GPN3Q06543 272 aa2.12□□□□□ -2.07
PEP12YOR036W ASR1Q06834 288 aa2.12□□□□□ -2.07
PEP12YOR036W RLP24Q07915 199 aaKnown RBP2.12□□□□□ -2.07
PEP12YOR036W RPL21BQ12672 160 aaKnown RBP2.12□□□□□ -2.07
PEP12YOR036W MHP1P43638 1398 aa2.11□□□□□ -2.07
PEP12YOR036W TDH3P00359 332 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
PEP12YOR036W RSR1P13856 272 aa2.11□□□□□ -2.07
PEP12YOR036W BGL2P15703 313 aaKnown RBP2.11□□□□□ -2.07
PEP12YOR036W ERD1P16151 362 aa2.11□□□□□ -2.07
PEP12YOR036W YSR3P23501 404 aa2.11□□□□□ -2.07
PEP12YOR036W IFM1P25038 676 aa2.11□□□□□ -2.07
PEP12YOR036W COT1P32798 439 aa2.11□□□□□ -2.07
PEP12YOR036W IMP3P32899 183 aaPredicted RBP2.11□□□□□ -2.07
PEP12YOR036W TIP20P33891 701 aa2.11□□□□□ -2.07
PEP12YOR036W MRPL27P36526 146 aaPredicted RBP2.11□□□□□ -2.07
PEP12YOR036W GPI18P38211 433 aa2.11□□□□□ -2.07
PEP12YOR036W WSC4P38739 605 aa2.11□□□□□ -2.07
PEP12YOR036W SPT8P38915 602 aa2.11□□□□□ -2.07
PEP12YOR036W STB1P42845 420 aa2.11□□□□□ -2.07
PEP12YOR036W YPT32P51996 222 aaKnown RBP2.11□□□□□ -2.07
PEP12YOR036W SDS23P53172 527 aa2.11□□□□□ -2.07
PEP12YOR036W TPS1Q00764 495 aaKnown RBP2.11□□□□□ -2.07
PEP12YOR036W RMI1Q02685 241 aa2.11□□□□□ -2.07
PEP12YOR036W YDR115WQ04598 105 aa2.11□□□□□ -2.07
PEP12YOR036W COX20Q04935 205 aa2.11□□□□□ -2.07
PEP12YOR036W MIM1Q08176 113 aa2.11□□□□□ -2.07
PEP12YOR036W MMT2Q08970 484 aa2.11□□□□□ -2.07
PEP12YOR036W YPL245WQ12179 454 aaKnown RBP2.11□□□□□ -2.07
PEP12YOR036W ERP3Q12403 225 aa2.11□□□□□ -2.07
PEP12YOR036W SSK22P25390 1331 aaPredicted RBP2.11□□□□□ -2.07
PEP12YOR036W HSP26P15992 214 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
PEP12YOR036W MRPL20P22354 195 aaPredicted RBP2.1□□□□□ -2.07
PEP12YOR036W SKG6P32900 734 aaPredicted RBP2.1□□□□□ -2.07
PEP12YOR036W TDA11P38854 504 aa2.1□□□□□ -2.07
PEP12YOR036W PRM9P39551 298 aa2.1□□□□□ -2.07
PEP12YOR036W NPT1P39683 429 aaKnown RBP2.1□□□□□ -2.07
PEP12YOR036W NUP84P52891 726 aa2.1□□□□□ -2.07
PEP12YOR036W YPS5P53057 165 aa2.1□□□□□ -2.07
PEP12YOR036W NRM1P53718 249 aa2.1□□□□□ -2.07
PEP12YOR036W TIM11P81449 96 aaPredicted RBP2.1□□□□□ -2.07
PEP12YOR036W MRX11Q03079 207 aa2.1□□□□□ -2.07
PEP12YOR036W VBA1Q04301 562 aa2.1□□□□□ -2.07
PEP12YOR036W TMC1Q08422 150 aaPredicted RBP2.1□□□□□ -2.07
PEP12YOR036W SRO7Q12038 1033 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms