RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W YLR413WQ06689 675 aa2.08□□□□□ -2.08
SNF12YNR023W ADH1P00330 348 aaKnown RBP2.07□□□□□ -2.08
SNF12YNR023W RAD7P06779 565 aa2.07□□□□□ -2.08
SNF12YNR023W PUT4P15380 627 aa2.07□□□□□ -2.08
SNF12YNR023W RAD23P32628 398 aaKnown RBP2.07□□□□□ -2.08
SNF12YNR023W TIP20P33891 701 aa2.07□□□□□ -2.08
SNF12YNR023W DTR1P38125 572 aa2.07□□□□□ -2.08
SNF12YNR023W HIT1P46973 164 aa2.07□□□□□ -2.08
SNF12YNR023W YGR018CP53211 109 aa2.07□□□□□ -2.08
SNF12YNR023W SNX41Q04053 625 aa2.07□□□□□ -2.08
SNF12YNR023W API2Q04413 109 aa2.07□□□□□ -2.08
SNF12YNR023W ECM18Q04623 453 aa2.07□□□□□ -2.08
SNF12YNR023W ERV41Q04651 352 aa2.07□□□□□ -2.08
SNF12YNR023W YPQ1Q12010 308 aa2.07□□□□□ -2.08
SNF12YNR023W YPL245WQ12179 454 aaKnown RBP2.07□□□□□ -2.08
SNF12YNR023W UTP23Q12339 254 aaKnown RBP2.07□□□□□ -2.08
SNF12YNR023W IZH4Q99393 312 aa2.07□□□□□ -2.08
SNF12YNR023W RPC40P07703 335 aaKnown RBP2.06□□□□□ -2.08
SNF12YNR023W GAL7P08431 366 aa2.06□□□□□ -2.08
SNF12YNR023W ERD1P16151 362 aa2.06□□□□□ -2.08
SNF12YNR023W YKL187CP34231 750 aa2.06□□□□□ -2.08
SNF12YNR023W SMP1P38128 452 aa2.06□□□□□ -2.08
SNF12YNR023W RCK1P38622 512 aa2.06□□□□□ -2.08
SNF12YNR023W CTM1P38818 585 aa2.06□□□□□ -2.08
SNF12YNR023W YFL012WP43580 148 aa2.06□□□□□ -2.08
SNF12YNR023W SDS23P53172 527 aa2.06□□□□□ -2.08
SNF12YNR023W PNC1P53184 216 aaKnown RBP2.06□□□□□ -2.08
SNF12YNR023W YGR266WP53326 701 aa2.06□□□□□ -2.08
SNF12YNR023W ECM11Q04110 302 aa2.06□□□□□ -2.08
SNF12YNR023W BCP1Q06338 283 aa2.06□□□□□ -2.08
SNF12YNR023W PBP4Q07362 185 aaKnown RBP2.06□□□□□ -2.08
SNF12YNR023W APC9Q12107 265 aa2.06□□□□□ -2.08
SNF12YNR023W RPS19AP07280 144 aaKnown RBP2.05□□□□□ -2.08
SNF12YNR023W RPS19BP07281 144 aaPredicted RBP2.05□□□□□ -2.08
SNF12YNR023W MCH2P36032 473 aa2.05□□□□□ -2.08
SNF12YNR023W SWD2P36104 329 aaPredicted RBP2.05□□□□□ -2.08
SNF12YNR023W TAE1P38340 232 aa2.05□□□□□ -2.08
SNF12YNR023W PEX18P38855 283 aa2.05□□□□□ -2.08
SNF12YNR023W SOP4P39543 234 aaPredicted RBP2.05□□□□□ -2.08
SNF12YNR023W RRT13P40042 185 aa2.05□□□□□ -2.08
SNF12YNR023W KEL2P50090 882 aa2.05□□□□□ -2.08
SNF12YNR023W SWC4P53201 476 aa2.05□□□□□ -2.08
SNF12YNR023W TPC1P53257 314 aa2.05□□□□□ -2.08
SNF12YNR023W BIO4P53630 237 aa2.05□□□□□ -2.08
SNF12YNR023W YNL260CP53846 198 aa2.05□□□□□ -2.08
SNF12YNR023W BSC6Q08280 497 aa2.05□□□□□ -2.08
SNF12YNR023W SPS100P13130 326 aa2.05□□□□□ -2.08
SNF12YNR023W IFM1P25038 676 aa2.05□□□□□ -2.08
SNF12YNR023W RPL16BP26785 198 aaKnown RBP2.05□□□□□ -2.08
SNF12YNR023W INO2P26798 304 aa2.05□□□□□ -2.08
SNF12YNR023W DSE1P40077 573 aa2.05□□□□□ -2.08
SNF12YNR023W GCD14P46959 383 aaPredicted RBP2.05□□□□□ -2.08
SNF12YNR023W GTO1P48239 356 aa2.05□□□□□ -2.08
SNF12YNR023W YPL077CQ02831 240 aa2.05□□□□□ -2.08
SNF12YNR023W YMR111CQ04461 462 aaPredicted RBP2.05□□□□□ -2.08
SNF12YNR023W YDR018CQ12185 396 aa2.05□□□□□ -2.08
SNF12YNR023W MRPL20P22354 195 aaPredicted RBP2.04□□□□□ -2.08
SNF12YNR023W GPI12P23797 304 aa2.04□□□□□ -2.08
SNF12YNR023W RTT105P40063 208 aa2.04□□□□□ -2.08
SNF12YNR023W MIC19P43594 170 aa2.04□□□□□ -2.08
SNF12YNR023W MPP10P47083 593 aaKnown RBP2.04□□□□□ -2.08
SNF12YNR023W FLC3P53121 802 aa2.04□□□□□ -2.08
SNF12YNR023W PIN3Q06449 215 aa2.04□□□□□ -2.08
SNF12YNR023W BER1Q06688 274 aaKnown RBP2.04□□□□□ -2.08
SNF12YNR023W VIK1Q12045 647 aa2.04□□□□□ -2.08
SNF12YNR023W RAX2Q12465 1220 aa2.04□□□□□ -2.08
SNF12YNR023W MRPL23Q12487 163 aaPredicted RBP2.04□□□□□ -2.08
SNF12YNR023W YBL111CQ3E7Y5 667 aa2.04□□□□□ -2.08
SNF12YNR023W YAL067W-AQ8TGK6 75 aa2.04□□□□□ -2.08
SNF12YNR023W YOL085CQ99345 113 aa2.04□□□□□ -2.08
SNF12YNR023W BI3Q9ZZW7 517 aa2.04□□□□□ -2.08
SNF12YNR023W TDH3P00359 332 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SNF12YNR023W ATP6P00854 259 aa2.03□□□□□ -2.08
SNF12YNR023W RPL31AP0C2H8 113 aaKnown RBP2.03□□□□□ -2.08
SNF12YNR023W OM45P16547 393 aa2.03□□□□□ -2.08
SNF12YNR023W HPR1P17629 752 aaKnown RBP2.03□□□□□ -2.08
SNF12YNR023W MEK1P24719 497 aaPredicted RBP2.03□□□□□ -2.08
SNF12YNR023W ZIP1P31111 875 aa2.03□□□□□ -2.08
SNF12YNR023W RFT1P38206 574 aaPredicted RBP2.03□□□□□ -2.08
SNF12YNR023W HIS2P38635 335 aa2.03□□□□□ -2.08
SNF12YNR023W TDA11P38854 504 aa2.03□□□□□ -2.08
SNF12YNR023W UFE1P41834 346 aa2.03□□□□□ -2.08
SNF12YNR023W COQ5P49017 307 aa2.03□□□□□ -2.08
SNF12YNR023W UBC13P52490 153 aa2.03□□□□□ -2.08
SNF12YNR023W YGR067CP53243 804 aa2.03□□□□□ -2.08
SNF12YNR023W YNR066CP53752 436 aa2.03□□□□□ -2.08
SNF12YNR023W INP2Q03824 705 aa2.03□□□□□ -2.08
SNF12YNR023W UTP15Q04305 513 aaKnown RBP2.03□□□□□ -2.08
SNF12YNR023W YLR446WQ06204 433 aa2.03□□□□□ -2.08
SNF12YNR023W GPN3Q06543 272 aa2.03□□□□□ -2.08
SNF12YNR023W YOL029CQ08187 201 aa2.03□□□□□ -2.08
SNF12YNR023W RRP42Q12277 265 aaPredicted RBP2.03□□□□□ -2.08
SNF12YNR023W LAG2Q92325 660 aa2.03□□□□□ -2.08
SNF12YNR023W SSA3P09435 649 aaKnown RBP2.03□□□□□ -2.09
SNF12YNR023W CKA2P19454 339 aa2.03□□□□□ -2.09
SNF12YNR023W CSM1P25651 190 aa2.03□□□□□ -2.09
SNF12YNR023W CYM1P32898 989 aa2.03□□□□□ -2.09
SNF12YNR023W YKL063CP35725 167 aa2.03□□□□□ -2.09
SNF12YNR023W YKL070WP36087 169 aa2.03□□□□□ -2.09
SNF12YNR023W PET8P38921 284 aa2.03□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms