RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	YMC2	P38087	329 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	ROT2	P38138	954 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	PHO90	P39535	881 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	ERV46	P39727	415 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	HEM14	P40012	539 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	ERG28	P40030	148 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	SLM1	P40485	686 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	SSN8	P47821	323 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	YGR067C	P53243	804 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	OKP1	P53298	406 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	SLI1	P53304	468 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	SAM50	P53969	484 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	RHO4	Q00246	291 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	RRP17	Q04031	235 aa	Predicted RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	IVY1	Q04934	453 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	DCR2	Q05924	578 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	BRX1	Q08235	291 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	ABP140	Q08641	628 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	YOR387C	Q08910	206 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	SAM4	Q08985	325 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	VIK1	Q12045	647 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	RPL7B	Q12213	244 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	YLR108C	Q12259	485 aa		3.58	□□□□□ -1.84
PUB1	YNL016W	UTP20	P35194	2493 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	POL2	P21951	2222 aa	Known RBP	3.58	□□□□□ -1.84
PUB1	YNL016W	MAK32	P23060	363 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	POP5	P28005	173 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	ACB1	P31787	87 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	SKT5	P34226	696 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	CBT1	P36038	271 aa	Predicted RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	FHL1	P39521	936 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	YIL060W	P40519	144 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	YIL001W	P40560	513 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	GUF1	P46943	645 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	AIM24	P47127	394 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	CWC23	P52868	283 aa	Predicted RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	NBP1	P52919	319 aa	Predicted RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	VEL1	P53058	206 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	YPL014W	Q02606	381 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	SKI8	Q02793	397 aa	Predicted RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	GGA1	Q06336	557 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	SKI7	Q08491	747 aa	Predicted RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	APC9	Q12107	265 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	YRA1	Q12159	226 aa	Known RBP	3.57	□□□□□ -1.84
PUB1	YNL016W	YKL183C-A	Q3E765	70 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	TRA1	P38811	3744 aa		3.57	□□□□□ -1.84
PUB1	YNL016W	HEM2	P05373	342 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	ALG7	P07286	448 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	MRPL8	P22353	238 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	RBK1	P25332	333 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	SAT4	P25333	603 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	RPS2	P25443	254 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	ERG9	P29704	444 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	NUP2	P32499	720 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	MNS1	P32906	549 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	TAF14	P35189	244 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	IST2	P38250	946 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	URA8	P38627	578 aa	Predicted RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	CCT4	P39078	528 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	NPT1	P39683	429 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	SEC72	P39742	193 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	YJR054W	P47114	497 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	MNN10	P50108	393 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	SEH1	P53011	349 aa	Known RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	FLC3	P53121	802 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	PXR1	P53335	271 aa	Predicted RBP	3.56	□□□□□ -1.84
PUB1	YNL016W	RRN9	P53437	365 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	MTQ1	P53944	314 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	CAC2	Q04199	468 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	TMA10	Q06177	86 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	ARR2	Q06597	130 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	REX4	Q08237	289 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	MCH4	Q08268	501 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	SRL2	Q12020	392 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	RKM5	Q12367	367 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	ORT1	Q12375	292 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	RRI1	Q12468	440 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	YCL012C	Q8J0M4	134 aa		3.56	□□□□□ -1.84
PUB1	YNL016W	RPS13	P05756	151 aa	Known RBP	3.55	□□□□□ -1.84
PUB1	YNL016W	TPK3	P05986	398 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	YBR121C-A	P0C5L4	52 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	MRP1	P10662	321 aa	Known RBP	3.55	□□□□□ -1.84
PUB1	YNL016W	YAK1	P14680	807 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	CBF1	P17106	351 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	ARF2	P19146	181 aa	Known RBP	3.55	□□□□□ -1.84
PUB1	YNL016W	PTP1	P25044	335 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	YCR006C	P25350	157 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	YCR007C	P25354	239 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	DCC1	P25559	380 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	BUB3	P26449	341 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	SNC1	P31109	117 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	VPS21	P36017	210 aa	Known RBP	3.55	□□□□□ -1.84
PUB1	YNL016W	MIC12	P38341	106 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	ATG7	P38862	630 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	FAA2	P39518	744 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	BDH2	P39713	417 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	PCL6	P40038	420 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	DDI1	P40087	428 aa		3.55	□□□□□ -1.84
PUB1	YNL016W	TIF34	P40217	347 aa	Known RBP	3.55	□□□□□ -1.84
PUB1	YNL016W	SIM1	P40472	476 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms