RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C FRE7Q12333 620 aa4.25□□□□□ -1.73
EAR1YMR171C ATG31Q12421 196 aa4.25□□□□□ -1.73
EAR1YMR171C SFG1Q12507 346 aa4.25□□□□□ -1.73
EAR1YMR171C YOR338WQ99326 363 aa4.25□□□□□ -1.73
EAR1YMR171C TAD3Q9URQ3 322 aa4.25□□□□□ -1.73
EAR1YMR171C CET1O13297 549 aaPredicted RBP4.24□□□□□ -1.73
EAR1YMR171C YPR096CO13587 100 aa4.24□□□□□ -1.73
EAR1YMR171C CPA1P07258 411 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C PET9P18239 318 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C RPS1BP23248 255 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C PHO84P25297 587 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C PEX34P25584 144 aa4.24□□□□□ -1.73
EAR1YMR171C OAC1P32332 324 aa4.24□□□□□ -1.73
EAR1YMR171C ATP11P32453 318 aa4.24□□□□□ -1.73
EAR1YMR171C NAT2P37293 288 aa4.24□□□□□ -1.73
EAR1YMR171C ZTA1P38230 334 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C LRP1P38801 184 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C ATG18P43601 500 aa4.24□□□□□ -1.73
EAR1YMR171C IRC7P43623 340 aa4.24□□□□□ -1.73
EAR1YMR171C IRC18P47056 224 aa4.24□□□□□ -1.73
EAR1YMR171C YAE1P47118 141 aaPredicted RBP4.24□□□□□ -1.73
EAR1YMR171C STE24P47154 453 aa4.24□□□□□ -1.73
EAR1YMR171C AAD10P47182 288 aa4.24□□□□□ -1.73
EAR1YMR171C TPN1P53099 579 aa4.24□□□□□ -1.73
EAR1YMR171C MPS2P53159 387 aa4.24□□□□□ -1.73
EAR1YMR171C PRM1P53835 661 aa4.24□□□□□ -1.73
EAR1YMR171C INN1P53901 409 aa4.24□□□□□ -1.73
EAR1YMR171C YSA1Q01976 231 aa4.24□□□□□ -1.73
EAR1YMR171C NUP116Q02630 1113 aa4.24□□□□□ -1.73
EAR1YMR171C TDA1Q03533 586 aa4.24□□□□□ -1.73
EAR1YMR171C TPO3Q06451 622 aa4.24□□□□□ -1.73
EAR1YMR171C RRP9Q06506 573 aaKnown RBP4.24□□□□□ -1.73
EAR1YMR171C YNG1Q08465 219 aa4.24□□□□□ -1.73
EAR1YMR171C YOR387CQ08910 206 aa4.24□□□□□ -1.73
EAR1YMR171C MDM32Q12171 622 aa4.24□□□□□ -1.73
EAR1YMR171C RTN2Q12443 393 aa4.24□□□□□ -1.73
EAR1YMR171C YPR117WQ06116 2489 aa4.24□□□□□ -1.73
EAR1YMR171C TAH1P25638 111 aaPredicted RBP4.23□□□□□ -1.73
EAR1YMR171C IDH1P28834 360 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
EAR1YMR171C HYM1P32464 399 aa4.23□□□□□ -1.73
EAR1YMR171C GCS1P35197 352 aa4.23□□□□□ -1.73
EAR1YMR171C INM1P38710 295 aa4.23□□□□□ -1.73
EAR1YMR171C CCT6P39079 546 aa4.23□□□□□ -1.73
EAR1YMR171C RCY1P39531 840 aa4.23□□□□□ -1.73
EAR1YMR171C JHD1P40034 492 aa4.23□□□□□ -1.73
EAR1YMR171C ATF1P40353 525 aa4.23□□□□□ -1.73
EAR1YMR171C SEC24P40482 926 aaKnown RBP4.23□□□□□ -1.73
EAR1YMR171C YJL218WP40892 196 aaKnown RBP4.23□□□□□ -1.73
EAR1YMR171C ERG10P41338 398 aaKnown RBP4.23□□□□□ -1.73
EAR1YMR171C GDS1P41913 522 aa4.23□□□□□ -1.73
EAR1YMR171C MPC1P53157 130 aaKnown RBP4.23□□□□□ -1.73
EAR1YMR171C RBG2P53295 368 aaKnown RBP4.23□□□□□ -1.73
EAR1YMR171C RRN9P53437 365 aa4.23□□□□□ -1.73
EAR1YMR171C RIM13Q03792 727 aa4.23□□□□□ -1.73
EAR1YMR171C AIM36Q03798 255 aa4.23□□□□□ -1.73
EAR1YMR171C GPN3Q06543 272 aa4.23□□□□□ -1.73
EAR1YMR171C ASR1Q06834 288 aa4.23□□□□□ -1.73
EAR1YMR171C NDD1Q08887 554 aa4.23□□□□□ -1.73
EAR1YMR171C YDR524C-BQ3E6R4 66 aa4.23□□□□□ -1.73
EAR1YMR171C YBR298C-AQ8TGK4 73 aa4.23□□□□□ -1.73
EAR1YMR171C RPC40P07703 335 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C ARF2P19146 181 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C NUP1P20676 1076 aa4.22□□□□□ -1.73
EAR1YMR171C SLM5P25345 492 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C ERG9P29704 444 aa4.22□□□□□ -1.73
EAR1YMR171C NDC1P32500 655 aa4.22□□□□□ -1.73
EAR1YMR171C ORC2P32833 620 aa4.22□□□□□ -1.73
EAR1YMR171C SSO1P32867 290 aa4.22□□□□□ -1.73
EAR1YMR171C YHR127WP38833 243 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C LSM5P40089 93 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C MMF1P40185 145 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C NDE1P40215 560 aa4.22□□□□□ -1.73
EAR1YMR171C YFR018CP43599 363 aa4.22□□□□□ -1.73
EAR1YMR171C PAC10P48363 199 aa4.22□□□□□ -1.73
EAR1YMR171C YGR266WP53326 701 aa4.22□□□□□ -1.73
EAR1YMR171C CWC25P53854 179 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C LSM7P53905 115 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C DID2P69771 204 aa4.22□□□□□ -1.73
EAR1YMR171C YMR178WQ03219 274 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C RSM28Q03430 361 aa4.22□□□□□ -1.73
EAR1YMR171C CLP1Q08685 445 aaPredicted RBP4.22□□□□□ -1.73
EAR1YMR171C RRG7Q08774 242 aaPredicted RBP4.22□□□□□ -1.73
EAR1YMR171C YOR214CQ12282 236 aa4.22□□□□□ -1.73
EAR1YMR171C FMP16Q12497 93 aa4.22□□□□□ -1.73
EAR1YMR171C VPS13Q07878 3144 aa4.22□□□□□ -1.73
EAR1YMR171C YEL009C-AA0A023PZF2 135 aa4.22□□□□□ -1.73
EAR1YMR171C YBR085C-AO43137 85 aa4.22□□□□□ -1.73
EAR1YMR171C COX3P00420 269 aa4.22□□□□□ -1.73
EAR1YMR171C EPT1P22140 391 aa4.22□□□□□ -1.73
EAR1YMR171C RNP1P32385 249 aa4.22□□□□□ -1.73
EAR1YMR171C LHP1P33399 275 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C SOF1P33750 489 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C JEN1P36035 616 aa4.22□□□□□ -1.73
EAR1YMR171C SOL2P37262 315 aa4.22□□□□□ -1.73
EAR1YMR171C YBR137WP38276 179 aa4.22□□□□□ -1.73
EAR1YMR171C STP2P38704 541 aa4.22□□□□□ -1.73
EAR1YMR171C BIG1P38813 335 aa4.22□□□□□ -1.73
EAR1YMR171C TIM17P39515 158 aa4.22□□□□□ -1.73
EAR1YMR171C YER137CP40083 148 aaKnown RBP4.22□□□□□ -1.73
EAR1YMR171C YIR016WP40572 265 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms