RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C BTS1Q12051 335 aa1.12□□□□□ -2.23
NUP188YML103C YER078W-AQ3E7A2 54 aa1.12□□□□□ -2.23
NUP188YML103C AIM29P36154 155 aa1.12□□□□□ -2.23
NUP188YML103C SHE1P38200 338 aa1.12□□□□□ -2.23
NUP188YML103C PTI1P39927 425 aaPredicted RBP1.12□□□□□ -2.23
NUP188YML103C DSN1P40568 576 aa1.12□□□□□ -2.23
NUP188YML103C ATG18P43601 500 aa1.12□□□□□ -2.23
NUP188YML103C CIN2P46670 268 aa1.12□□□□□ -2.23
NUP188YML103C UBC13P52490 153 aa1.12□□□□□ -2.23
NUP188YML103C PNC1P53184 216 aaKnown RBP1.12□□□□□ -2.23
NUP188YML103C TDA1Q03533 586 aa1.12□□□□□ -2.23
NUP188YML103C YML018CQ03730 393 aa1.12□□□□□ -2.23
NUP188YML103C SNX41Q04053 625 aa1.12□□□□□ -2.23
NUP188YML103C YET2Q04210 160 aa1.12□□□□□ -2.23
NUP188YML103C ATG17Q06410 417 aa1.12□□□□□ -2.23
NUP188YML103C GAT3Q07928 141 aa1.12□□□□□ -2.23
NUP188YML103C YPQ1Q12010 308 aa1.12□□□□□ -2.23
NUP188YML103C ATP16Q12165 160 aa1.12□□□□□ -2.23
NUP188YML103C MRPL23Q12487 163 aaPredicted RBP1.12□□□□□ -2.23
NUP188YML103C TDH3P00359 332 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
NUP188YML103C ERD1P16151 362 aa1.12□□□□□ -2.23
NUP188YML103C CSM1P25651 190 aa1.12□□□□□ -2.23
NUP188YML103C CDC50P25656 391 aa1.12□□□□□ -2.23
NUP188YML103C SPR1P32603 445 aa1.12□□□□□ -2.23
NUP188YML103C YKL063CP35725 167 aa1.12□□□□□ -2.23
NUP188YML103C VPS21P36017 210 aaKnown RBP1.12□□□□□ -2.23
NUP188YML103C MCH2P36032 473 aa1.12□□□□□ -2.23
NUP188YML103C SOP4P39543 234 aaPredicted RBP1.12□□□□□ -2.23
NUP188YML103C HIT1P46973 164 aa1.12□□□□□ -2.23
NUP188YML103C ASG7P46993 209 aa1.12□□□□□ -2.23
NUP188YML103C TOS2P50078 622 aa1.12□□□□□ -2.23
NUP188YML103C YPT32P51996 222 aaKnown RBP1.12□□□□□ -2.23
NUP188YML103C SLX9P53251 210 aaPredicted RBP1.12□□□□□ -2.23
NUP188YML103C RLP24Q07915 199 aaKnown RBP1.12□□□□□ -2.23
NUP188YML103C YOR387CQ08910 206 aa1.12□□□□□ -2.23
NUP188YML103C LAG2Q92325 660 aa1.12□□□□□ -2.23
NUP188YML103C CYC3P06182 269 aa1.11□□□□□ -2.23
NUP188YML103C EPT1P22140 391 aa1.11□□□□□ -2.23
NUP188YML103C RRT12P25381 491 aa1.11□□□□□ -2.23
NUP188YML103C INO2P26798 304 aa1.11□□□□□ -2.23
NUP188YML103C AGA1P32323 725 aa1.11□□□□□ -2.23
NUP188YML103C SRB4P32569 687 aa1.11□□□□□ -2.23
NUP188YML103C PPQ1P32945 549 aa1.11□□□□□ -2.23
NUP188YML103C AIM10P39965 576 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C UTP18P40362 594 aaPredicted RBP1.11□□□□□ -2.23
NUP188YML103C COS1P53822 381 aa1.11□□□□□ -2.23
NUP188YML103C VHS1Q03785 461 aa1.11□□□□□ -2.23
NUP188YML103C MCH1Q07376 486 aa1.11□□□□□ -2.23
NUP188YML103C PER33Q12144 273 aa1.11□□□□□ -2.23
NUP188YML103C HIS1P00498 297 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C REP1P03871 373 aa1.11□□□□□ -2.23
NUP188YML103C RPB4P20433 221 aaPredicted RBP1.11□□□□□ -2.23
NUP188YML103C UTR1P21373 530 aa1.11□□□□□ -2.23
NUP188YML103C AEP1P32493 518 aa1.11□□□□□ -2.23
NUP188YML103C YKL162CP36052 402 aa1.11□□□□□ -2.23
NUP188YML103C HSM3P38348 480 aa1.11□□□□□ -2.23
NUP188YML103C ECM34P38728 170 aa1.11□□□□□ -2.23
NUP188YML103C GGC1P38988 300 aa1.11□□□□□ -2.23
NUP188YML103C YIL067CP40514 678 aa1.11□□□□□ -2.23
NUP188YML103C YIL054WP40524 105 aa1.11□□□□□ -2.23
NUP188YML103C TAD2P47058 250 aa1.11□□□□□ -2.23
NUP188YML103C ABM1P47146 123 aa1.11□□□□□ -2.23
NUP188YML103C SDS23P53172 527 aa1.11□□□□□ -2.23
NUP188YML103C RNH1Q04740 348 aa1.11□□□□□ -2.23
NUP188YML103C MHP1P43638 1398 aa1.11□□□□□ -2.23
NUP188YML103C SSO1P32867 290 aa1.11□□□□□ -2.23
NUP188YML103C CYM1P32898 989 aa1.11□□□□□ -2.23
NUP188YML103C MRPL6P32904 214 aa1.11□□□□□ -2.23
NUP188YML103C TIP20P33891 701 aa1.11□□□□□ -2.23
NUP188YML103C TPO5P36029 618 aa1.11□□□□□ -2.23
NUP188YML103C YGR015CP53208 328 aa1.11□□□□□ -2.23
NUP188YML103C RSM27P53305 110 aa1.11□□□□□ -2.23
NUP188YML103C ASR1Q06834 288 aa1.11□□□□□ -2.23
NUP188YML103C YLL007CQ07799 665 aa1.11□□□□□ -2.23
NUP188YML103C SME1Q12330 94 aaPredicted RBP1.11□□□□□ -2.23
NUP188YML103C TRM10Q12400 293 aa1.11□□□□□ -2.23
NUP188YML103C SEY1Q99287 776 aa1.11□□□□□ -2.23
NUP188YML103C DET1Q99288 334 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C CKA2P19454 339 aa1.11□□□□□ -2.23
NUP188YML103C OSM1P21375 501 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C BMH2P34730 273 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C MRPS9P38120 278 aa1.11□□□□□ -2.23
NUP188YML103C PRS2P38620 318 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C CHL4P38907 458 aa1.11□□□□□ -2.23
NUP188YML103C YFL064CP43540 174 aa1.11□□□□□ -2.23
NUP188YML103C CPD1P53314 239 aa1.11□□□□□ -2.23
NUP188YML103C TPS1Q00764 495 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C YMR226CQ05016 267 aaKnown RBP1.11□□□□□ -2.23
NUP188YML103C SEC10Q06245 871 aa1.11□□□□□ -2.23
NUP188YML103C DXO1Q06349 442 aa1.11□□□□□ -2.23
NUP188YML103C RRG7Q08774 242 aaPredicted RBP1.11□□□□□ -2.23
NUP188YML103C FRE8Q12209 686 aa1.11□□□□□ -2.23
NUP188YML103C RPL31AP0C2H8 113 aaKnown RBP1.1□□□□□ -2.23
NUP188YML103C BGL2P15703 313 aaKnown RBP1.1□□□□□ -2.23
NUP188YML103C ISY1P21374 235 aaPredicted RBP1.1□□□□□ -2.23
NUP188YML103C MRPL25P23369 157 aa1.1□□□□□ -2.23
NUP188YML103C MRX3P38172 270 aa1.1□□□□□ -2.23
NUP188YML103C SEO1P39709 593 aa1.1□□□□□ -2.23
NUP188YML103C OXA1P39952 402 aa1.1□□□□□ -2.23
NUP188YML103C MEP2P41948 499 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms