RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C CWP1P28319 239 aa3.8□□□□□ -1.8
VPS71YML041C DOA4P32571 926 aa3.8□□□□□ -1.8
VPS71YML041C RPC37P36121 282 aa3.8□□□□□ -1.8
VPS71YML041C DTR1P38125 572 aa3.8□□□□□ -1.8
VPS71YML041C SMF2P38778 549 aa3.8□□□□□ -1.8
VPS71YML041C NDT80P38830 627 aa3.8□□□□□ -1.8
VPS71YML041C RTR1P40084 226 aaPredicted RBP3.8□□□□□ -1.8
VPS71YML041C YPI1P43587 155 aa3.8□□□□□ -1.8
VPS71YML041C BIO3P50277 480 aa3.8□□□□□ -1.8
VPS71YML041C PGA2P53903 129 aa3.8□□□□□ -1.8
VPS71YML041C YMR209CQ03648 457 aa3.8□□□□□ -1.8
VPS71YML041C TRM82Q03774 444 aa3.8□□□□□ -1.8
VPS71YML041C YTH1Q06102 208 aaPredicted RBP3.8□□□□□ -1.8
VPS71YML041C RIF2Q06208 395 aa3.8□□□□□ -1.8
VPS71YML041C RDL2Q08742 149 aaKnown RBP3.8□□□□□ -1.8
VPS71YML041C RRP42Q12277 265 aaPredicted RBP3.8□□□□□ -1.8
VPS71YML041C UTP23Q12339 254 aaKnown RBP3.8□□□□□ -1.8
VPS71YML041C ADF1Q2V2Q1 113 aa3.8□□□□□ -1.8
VPS71YML041C RPL31AP0C2H8 113 aaKnown RBP3.79□□□□□ -1.8
VPS71YML041C RPL16BP26785 198 aaKnown RBP3.79□□□□□ -1.8
VPS71YML041C LDS1P31379 325 aa3.79□□□□□ -1.8
VPS71YML041C SHQ1P40486 507 aaPredicted RBP3.79□□□□□ -1.8
VPS71YML041C MSS2P40990 351 aa3.79□□□□□ -1.8
VPS71YML041C YGR210CP42942 411 aa3.79□□□□□ -1.8
VPS71YML041C OTU1P43558 301 aa3.79□□□□□ -1.8
VPS71YML041C ATG18P43601 500 aa3.79□□□□□ -1.8
VPS71YML041C YFR057WP43625 151 aa3.79□□□□□ -1.8
VPS71YML041C PAM18Q07914 168 aa3.79□□□□□ -1.8
VPS71YML041C FRE8Q12209 686 aa3.79□□□□□ -1.8
VPS71YML041C JID1Q12350 301 aa3.79□□□□□ -1.8
VPS71YML041C IZH2Q12442 317 aa3.79□□□□□ -1.8
VPS71YML041C PRM4Q12498 284 aa3.79□□□□□ -1.8
VPS71YML041C ADH2P00331 348 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C HIS1P00498 297 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C REP1P03871 373 aa3.78□□□□□ -1.8
VPS71YML041C KRE6P32486 720 aa3.78□□□□□ -1.8
VPS71YML041C PRS1P32895 427 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C CBF5P33322 483 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VPS71YML041C KTI12P34253 313 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C PRS4P38063 326 aaPredicted RBP3.78□□□□□ -1.8
VPS71YML041C HEM14P40012 539 aa3.78□□□□□ -1.8
VPS71YML041C YNL208WP40159 199 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C SLM1P40485 686 aa3.78□□□□□ -1.8
VPS71YML041C TIM21P53220 239 aa3.78□□□□□ -1.8
VPS71YML041C SHY1P53266 389 aa3.78□□□□□ -1.8
VPS71YML041C CRH1P53301 507 aa3.78□□□□□ -1.8
VPS71YML041C CPD1P53314 239 aa3.78□□□□□ -1.8
VPS71YML041C SUR7P54003 302 aa3.78□□□□□ -1.8
VPS71YML041C INP2Q03824 705 aa3.78□□□□□ -1.8
VPS71YML041C KRE28Q04431 385 aa3.78□□□□□ -1.8
VPS71YML041C GAS2Q06135 555 aa3.78□□□□□ -1.8
VPS71YML041C SDO1Q07953 250 aaKnown RBP3.78□□□□□ -1.8
VPS71YML041C ATG31Q12421 196 aa3.78□□□□□ -1.8
VPS71YML041C ERD1P16151 362 aa3.77□□□□□ -1.81
VPS71YML041C MIR1P23641 311 aaKnown RBP3.77□□□□□ -1.81
VPS71YML041C DEP1P31385 405 aa3.77□□□□□ -1.81
VPS71YML041C CSE1P33307 960 aa3.77□□□□□ -1.81
VPS71YML041C MCH2P36032 473 aa3.77□□□□□ -1.81
VPS71YML041C CAB3P36076 571 aa3.77□□□□□ -1.81
VPS71YML041C DDI1P40087 428 aa3.77□□□□□ -1.81
VPS71YML041C COA1P40452 197 aa3.77□□□□□ -1.81
VPS71YML041C EGT2P42835 1041 aa3.77□□□□□ -1.81
VPS71YML041C MOB2P43563 287 aa3.77□□□□□ -1.81
VPS71YML041C TAD2P47058 250 aa3.77□□□□□ -1.81
VPS71YML041C GTO3Q04806 366 aa3.77□□□□□ -1.81
VPS71YML041C MRX9Q07349 420 aaKnown RBP3.77□□□□□ -1.81
VPS71YML041C IRC25Q07951 179 aa3.77□□□□□ -1.81
VPS71YML041C POM33Q12164 279 aa3.77□□□□□ -1.81
VPS71YML041C YPR064WQ12492 139 aa3.77□□□□□ -1.81
VPS71YML041C YOS9Q99220 542 aa3.77□□□□□ -1.81
VPS71YML041C ISY1P21374 235 aaPredicted RBP3.76□□□□□ -1.81
VPS71YML041C IFM1P25038 676 aa3.76□□□□□ -1.81
VPS71YML041C PMT2P31382 759 aa3.76□□□□□ -1.81
VPS71YML041C PDC2P32896 925 aa3.76□□□□□ -1.81
VPS71YML041C AIM29P36154 155 aa3.76□□□□□ -1.81
VPS71YML041C SWD3P38123 315 aa3.76□□□□□ -1.81
VPS71YML041C BIG1P38813 335 aa3.76□□□□□ -1.81
VPS71YML041C NPT1P39683 429 aaKnown RBP3.76□□□□□ -1.81
VPS71YML041C YER186CP40101 306 aa3.76□□□□□ -1.81
VPS71YML041C UBC13P52490 153 aa3.76□□□□□ -1.81
VPS71YML041C FSH2Q05015 223 aa3.76□□□□□ -1.81
VPS71YML041C ATG38Q05789 226 aaKnown RBP3.76□□□□□ -1.81
VPS71YML041C SFM1Q12314 213 aa3.76□□□□□ -1.81
VPS71YML041C TFC7Q12415 435 aa3.76□□□□□ -1.81
VPS71YML041C NAG1Q8TGN9 163 aa3.76□□□□□ -1.81
VPS71YML041C CFT1Q06632 1357 aaKnown RBP3.76□□□□□ -1.81
VPS71YML041C CHD1P32657 1468 aa3.75□□□□□ -1.81
VPS71YML041C TDH2P00358 332 aaKnown RBP3.75□□□□□ -1.81
VPS71YML041C RPL24BP24000 155 aaKnown RBP3.75□□□□□ -1.81
VPS71YML041C INO2P26798 304 aa3.75□□□□□ -1.81
VPS71YML041C URA10P30402 227 aa3.75□□□□□ -1.81
VPS71YML041C BAT1P38891 393 aaKnown RBP3.75□□□□□ -1.81
VPS71YML041C SOP4P39543 234 aaPredicted RBP3.75□□□□□ -1.81
VPS71YML041C AIM23P47015 356 aa3.75□□□□□ -1.81
VPS71YML041C GIM3P53900 129 aa3.75□□□□□ -1.81
VPS71YML041C VAC7P53950 1165 aa3.75□□□□□ -1.81
VPS71YML041C RPN8Q08723 338 aaKnown RBP3.75□□□□□ -1.81
VPS71YML041C RSA1Q08932 381 aa3.75□□□□□ -1.81
VPS71YML041C TAF10Q12030 206 aa3.75□□□□□ -1.81
VPS71YML041C ATP16Q12165 160 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms