RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YOR093CQ12275 1648 aa4.17□□□□□ -1.74
VPS36YLR417W MIR1P23641 311 aaKnown RBP4.17□□□□□ -1.74
VPS36YLR417W GIT1P25346 518 aa4.17□□□□□ -1.74
VPS36YLR417W MEI5P32489 222 aa4.17□□□□□ -1.74
VPS36YLR417W CBF5P33322 483 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
VPS36YLR417W DSE1P40077 573 aa4.17□□□□□ -1.74
VPS36YLR417W YER186CP40101 306 aa4.17□□□□□ -1.74
VPS36YLR417W BIO4P53630 237 aa4.17□□□□□ -1.74
VPS36YLR417W MRS2Q01926 470 aa4.17□□□□□ -1.74
VPS36YLR417W SKI8Q02793 397 aaPredicted RBP4.17□□□□□ -1.74
VPS36YLR417W IRC4Q03036 179 aa4.17□□□□□ -1.74
VPS36YLR417W FSH2Q05015 223 aa4.17□□□□□ -1.74
VPS36YLR417W GAS2Q06135 555 aa4.17□□□□□ -1.74
VPS36YLR417W MCT1Q12283 360 aa4.17□□□□□ -1.74
VPS36YLR417W FMP16Q12497 93 aa4.17□□□□□ -1.74
VPS36YLR417W RAD7P06779 565 aa4.16□□□□□ -1.74
VPS36YLR417W GPI12P23797 304 aa4.16□□□□□ -1.74
VPS36YLR417W MRPL37P36532 105 aa4.16□□□□□ -1.74
VPS36YLR417W YAP3P38749 330 aa4.16□□□□□ -1.74
VPS36YLR417W YHR035WP38769 630 aa4.16□□□□□ -1.74
VPS36YLR417W AIM10P39965 576 aaKnown RBP4.16□□□□□ -1.74
VPS36YLR417W RIO2P40160 425 aaKnown RBP4.16□□□□□ -1.74
VPS36YLR417W YFL040WP43562 540 aa4.16□□□□□ -1.74
VPS36YLR417W YNL050CP53952 270 aa4.16□□□□□ -1.74
VPS36YLR417W NKP2Q06162 153 aa4.16□□□□□ -1.74
VPS36YLR417W RRG7Q08774 242 aaPredicted RBP4.16□□□□□ -1.74
VPS36YLR417W ATP16Q12165 160 aa4.16□□□□□ -1.74
VPS36YLR417W HAP1P0CE41 1502 aa4.16□□□□□ -1.74
VPS36YLR417W TY1B-BRQ12193 1756 aa4.16□□□□□ -1.74
VPS36YLR417W TY1B-GR3Q12316 1755 aa4.16□□□□□ -1.74
VPS36YLR417W TY1B-ORQ92393 1755 aa4.16□□□□□ -1.74
VPS36YLR417W ADH2P00331 348 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W AAT2P23542 418 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W DTR1P38125 572 aa4.15□□□□□ -1.74
VPS36YLR417W OXA1P39952 402 aa4.15□□□□□ -1.74
VPS36YLR417W SUR7P54003 302 aa4.15□□□□□ -1.74
VPS36YLR417W YPL080CQ02826 108 aa4.15□□□□□ -1.74
VPS36YLR417W PBP4Q07362 185 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W BUD3P25558 1636 aa4.15□□□□□ -1.74
VPS36YLR417W TY1B-JR2P47100 1755 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W TY1B-ER2Q03619 1755 aa4.15□□□□□ -1.74
VPS36YLR417W TY1B-MR1Q04214 1755 aa4.15□□□□□ -1.74
VPS36YLR417W TY1B-MR2Q04670 1755 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W TY1B-LR1Q12088 1755 aaKnown RBP4.15□□□□□ -1.74
VPS36YLR417W TY1B-NL1Q12112 1755 aa4.15□□□□□ -1.74
VPS36YLR417W TY1B-GR1Q12141 1755 aa4.15□□□□□ -1.74
VPS36YLR417W TY1B-BLQ12490 1755 aa4.15□□□□□ -1.74
VPS36YLR417W SAL1D6W196 494 aa4.15□□□□□ -1.75
VPS36YLR417W REP1P03871 373 aa4.15□□□□□ -1.75
VPS36YLR417W CSM1P25651 190 aa4.15□□□□□ -1.75
VPS36YLR417W ICL1P28240 557 aaPredicted RBP4.15□□□□□ -1.75
VPS36YLR417W ZRT1P32804 376 aa4.15□□□□□ -1.75
VPS36YLR417W YUH1P35127 236 aa4.15□□□□□ -1.75
VPS36YLR417W MOB2P43563 287 aa4.15□□□□□ -1.75
VPS36YLR417W AIM23P47015 356 aa4.15□□□□□ -1.75
VPS36YLR417W KEL2P50090 882 aa4.15□□□□□ -1.75
VPS36YLR417W VAC7P53950 1165 aa4.15□□□□□ -1.75
VPS36YLR417W YET2Q04210 160 aa4.15□□□□□ -1.75
VPS36YLR417W YLR012CQ07927 99 aa4.15□□□□□ -1.75
VPS36YLR417W VMR1P38735 1592 aa4.14□□□□□ -1.75
VPS36YLR417W STE7P06784 515 aa4.14□□□□□ -1.75
VPS36YLR417W CTA1P15202 515 aa4.14□□□□□ -1.75
VPS36YLR417W PMT2P31382 759 aa4.14□□□□□ -1.75
VPS36YLR417W MED8P38304 223 aa4.14□□□□□ -1.75
VPS36YLR417W RRN5Q02983 363 aa4.14□□□□□ -1.75
VPS36YLR417W CSI1Q04368 295 aa4.14□□□□□ -1.75
VPS36YLR417W RDL2Q08742 149 aaKnown RBP4.14□□□□□ -1.75
VPS36YLR417W MLP1Q02455 1875 aaKnown RBP4.14□□□□□ -1.75
VPS36YLR417W SNF2P22082 1703 aa4.14□□□□□ -1.75
VPS36YLR417W LYS2P07702 1392 aa4.13□□□□□ -1.75
VPS36YLR417W SWD2P36104 329 aaPredicted RBP4.13□□□□□ -1.75
VPS36YLR417W HIS2P38635 335 aa4.13□□□□□ -1.75
VPS36YLR417W CTM1P38818 585 aa4.13□□□□□ -1.75
VPS36YLR417W SMC2P38989 1170 aaKnown RBP4.13□□□□□ -1.75
VPS36YLR417W PMT4P46971 762 aa4.13□□□□□ -1.75
VPS36YLR417W SEH1P53011 349 aaKnown RBP4.13□□□□□ -1.75
VPS36YLR417W MPP6P53725 186 aaPredicted RBP4.13□□□□□ -1.75
VPS36YLR417W PRP38Q00723 242 aaPredicted RBP4.13□□□□□ -1.75
VPS36YLR417W SML1Q04964 104 aa4.13□□□□□ -1.75
VPS36YLR417W YPQ1Q12010 308 aa4.13□□□□□ -1.75
VPS36YLR417W TAF10Q12030 206 aa4.13□□□□□ -1.75
VPS36YLR417W PSK1P31374 1356 aa4.13□□□□□ -1.75
VPS36YLR417W RPL24AP04449 155 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W RVS161P25343 265 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W COS9P36034 407 aa4.12□□□□□ -1.75
VPS36YLR417W SWD3P38123 315 aa4.12□□□□□ -1.75
VPS36YLR417W BAT1P38891 393 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W MIG3P39943 394 aa4.12□□□□□ -1.75
VPS36YLR417W HEM14P40012 539 aa4.12□□□□□ -1.75
VPS36YLR417W UTP18P40362 594 aaPredicted RBP4.12□□□□□ -1.75
VPS36YLR417W SLT2Q00772 484 aa4.12□□□□□ -1.75
VPS36YLR417W RRT8Q08219 342 aa4.12□□□□□ -1.75
VPS36YLR417W APC9Q12107 265 aa4.12□□□□□ -1.75
VPS36YLR417W HRT3Q12347 344 aa4.12□□□□□ -1.75
VPS36YLR417W PRM4Q12498 284 aa4.12□□□□□ -1.75
VPS36YLR417W RPS19AP07280 144 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W RPS19BP07281 144 aaPredicted RBP4.12□□□□□ -1.75
VPS36YLR417W UNG1P12887 359 aa4.12□□□□□ -1.75
VPS36YLR417W FRS2P15625 503 aaKnown RBP4.12□□□□□ -1.75
VPS36YLR417W CDC50P25656 391 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 173.8 ms