RNA–Protein interactions for RNA: YLR410W-A

YLR410W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR410W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-AYLR410W-A CSI1Q04368 295 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A RDL2Q08742 149 aaKnown RBP2.68□□□□□ -1.98
YLR410W-AYLR410W-A YPR063CQ12160 140 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A TFC7Q12415 435 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A SAL1D6W196 494 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A HPR1P17629 752 aaKnown RBP2.68□□□□□ -1.98
YLR410W-AYLR410W-A MRPL20P22354 195 aaPredicted RBP2.68□□□□□ -1.98
YLR410W-AYLR410W-A INO2P26798 304 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A ACB1P31787 87 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A VPH1P32563 840 aaKnown RBP2.68□□□□□ -1.98
YLR410W-AYLR410W-A SWI3P32591 825 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A YPL245WQ12179 454 aaKnown RBP2.68□□□□□ -1.98
YLR410W-AYLR410W-A YDR262WQ12331 272 aa2.68□□□□□ -1.98
YLR410W-AYLR410W-A DAL5P15365 543 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A ERD1P16151 362 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A SMI1P32566 505 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A YEL043WP32618 956 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A ECM14P38836 430 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A YGR168CP53293 376 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A HRT1Q08273 121 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A TRM10Q12400 293 aa2.67□□□□□ -1.98
YLR410W-AYLR410W-A RNR2P09938 399 aaKnown RBP2.66□□□□□ -1.98
YLR410W-AYLR410W-A CSE1P33307 960 aa2.66□□□□□ -1.98
YLR410W-AYLR410W-A ASP1P38986 381 aaPredicted RBP2.66□□□□□ -1.98
YLR410W-AYLR410W-A BUD13P46947 266 aaPredicted RBP2.66□□□□□ -1.98
YLR410W-AYLR410W-A MIM1Q08176 113 aa2.66□□□□□ -1.98
YLR410W-AYLR410W-A CBP2P03874 630 aaPredicted RBP2.65□□□□□ -1.99
YLR410W-AYLR410W-A BUD2P33314 1104 aa2.65□□□□□ -1.99
YLR410W-AYLR410W-A PSY3Q12318 242 aa2.65□□□□□ -1.99
YLR410W-AYLR410W-A TKL2P33315 681 aa2.64□□□□□ -1.99
YLR410W-AYLR410W-A IRC4Q03036 179 aa2.64□□□□□ -1.99
YLR410W-AYLR410W-A YDR114CQ04597 100 aa2.64□□□□□ -1.99
YLR410W-AYLR410W-A YLR012CQ07927 99 aa2.64□□□□□ -1.99
YLR410W-AYLR410W-A VIK1Q12045 647 aa2.64□□□□□ -1.99
YLR410W-AYLR410W-A PPQ1P32945 549 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A EDC2P40023 145 aaPredicted RBP2.63□□□□□ -1.99
YLR410W-AYLR410W-A ECO1P43605 281 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A FYV8P46949 817 aaKnown RBP2.63□□□□□ -1.99
YLR410W-AYLR410W-A YNR066CP53752 436 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A YDR222WQ04925 415 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A YPL264CQ08980 353 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A IES3Q12345 250 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A ERP3Q12403 225 aa2.63□□□□□ -1.99
YLR410W-AYLR410W-A ALK2P32789 676 aaPredicted RBP2.62□□□□□ -1.99
YLR410W-AYLR410W-A SUR1P33300 382 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A MED8P38304 223 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A PET8P38921 284 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A PES4P39684 611 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A SHE4P51534 789 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A GTO3Q04806 366 aa2.62□□□□□ -1.99
YLR410W-AYLR410W-A SGT2Q12118 346 aaKnown RBP2.62□□□□□ -1.99
YLR410W-AYLR410W-A ARO4P32449 370 aaKnown RBP2.61□□□□□ -1.99
YLR410W-AYLR410W-A UTR5P32630 166 aa2.61□□□□□ -1.99
YLR410W-AYLR410W-A UIP5P36137 443 aa2.61□□□□□ -1.99
YLR410W-AYLR410W-A LIN1P38852 340 aaPredicted RBP2.61□□□□□ -1.99
YLR410W-AYLR410W-A YGL088WP53151 121 aa2.61□□□□□ -1.99
YLR410W-AYLR410W-A UBX2Q04228 584 aa2.61□□□□□ -1.99
YLR410W-AYLR410W-A RLP24Q07915 199 aaKnown RBP2.61□□□□□ -1.99
YLR410W-AYLR410W-A RPL18AP0CX49 186 aaKnown RBP2.6□□□□□ -1.99
YLR410W-AYLR410W-A RPL18BP0CX50 186 aaKnown RBP2.6□□□□□ -1.99
YLR410W-AYLR410W-A GAL3P13045 520 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A ZRT1P32804 376 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A HSH155P49955 971 aaKnown RBP2.6□□□□□ -1.99
YLR410W-AYLR410W-A YNL040WP53960 456 aaPredicted RBP2.6□□□□□ -1.99
YLR410W-AYLR410W-A YPL080CQ02826 108 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A YPL113CQ02961 396 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A SNX41Q04053 625 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A ARC18Q05933 178 aaKnown RBP2.6□□□□□ -1.99
YLR410W-AYLR410W-A DXO1Q06349 442 aa2.6□□□□□ -1.99
YLR410W-AYLR410W-A DAL81P21657 970 aa2.59□□□□□ -2
YLR410W-AYLR410W-A MRPL6P32904 214 aa2.59□□□□□ -2
YLR410W-AYLR410W-A YHR035WP38769 630 aa2.59□□□□□ -2
YLR410W-AYLR410W-A SMC2P38989 1170 aaKnown RBP2.59□□□□□ -2
YLR410W-AYLR410W-A SOP4P39543 234 aaPredicted RBP2.59□□□□□ -2
YLR410W-AYLR410W-A UTP25P40498 721 aaKnown RBP2.59□□□□□ -2
YLR410W-AYLR410W-A SEC13Q04491 297 aaKnown RBP2.59□□□□□ -2
YLR410W-AYLR410W-A YOR292CQ08743 309 aa2.59□□□□□ -2
YLR410W-AYLR410W-A UTP23Q12339 254 aaKnown RBP2.59□□□□□ -2
YLR410W-AYLR410W-A LAG2Q92325 660 aa2.59□□□□□ -2
YLR410W-AYLR410W-A MIG1P27705 504 aa2.58□□□□□ -2
YLR410W-AYLR410W-A AIM29P36154 155 aa2.58□□□□□ -2
YLR410W-AYLR410W-A SDH4P37298 181 aa2.58□□□□□ -2
YLR410W-AYLR410W-A YFR045WP43617 309 aa2.58□□□□□ -2
YLR410W-AYLR410W-A MRX4Q12467 430 aa2.58□□□□□ -2
YLR410W-AYLR410W-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
YLR410W-AYLR410W-A MET2P08465 486 aa2.57□□□□□ -2
YLR410W-AYLR410W-A VPS1P21576 704 aaKnown RBP2.57□□□□□ -2
YLR410W-AYLR410W-A YPS1P32329 569 aa2.57□□□□□ -2
YLR410W-AYLR410W-A NAS2P40555 220 aa2.57□□□□□ -2
YLR410W-AYLR410W-A ACT1P60010 375 aaKnown RBP2.57□□□□□ -2
YLR410W-AYLR410W-A SAM4Q08985 325 aaKnown RBP2.57□□□□□ -2
YLR410W-AYLR410W-A IFM1P25038 676 aa2.56□□□□□ -2
YLR410W-AYLR410W-A VPH2P32341 215 aa2.56□□□□□ -2
YLR410W-AYLR410W-A YKR032WP36127 104 aa2.56□□□□□ -2
YLR410W-AYLR410W-A INA22P40576 216 aa2.56□□□□□ -2
YLR410W-AYLR410W-A YFL040WP43562 540 aa2.56□□□□□ -2
YLR410W-AYLR410W-A YGR266WP53326 701 aa2.56□□□□□ -2
YLR410W-AYLR410W-A YPR1Q12458 312 aa2.56□□□□□ -2
YLR410W-AYLR410W-A YAK1P14680 807 aa2.55□□□□□ -2
YLR410W-AYLR410W-A SCC4P40090 624 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms