RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W ATF1P40353 525 aa8.46□□□□□ -1.05
SFP1YLR403W SET4P42948 560 aa8.46□□□□□ -1.05
SFP1YLR403W GAT1P43574 510 aa8.46□□□□□ -1.05
SFP1YLR403W ALK1P43633 760 aaKnown RBP8.46□□□□□ -1.05
SFP1YLR403W PET130P47065 347 aa8.46□□□□□ -1.05
SFP1YLR403W YGR066CP53242 292 aa8.46□□□□□ -1.05
SFP1YLR403W VPS28Q02767 242 aa8.46□□□□□ -1.05
SFP1YLR403W TVP15Q03860 143 aa8.46□□□□□ -1.05
SFP1YLR403W RNH202Q05635 350 aa8.46□□□□□ -1.05
SFP1YLR403W ATG10Q07879 167 aa8.46□□□□□ -1.05
SFP1YLR403W YGK3Q12222 375 aaPredicted RBP8.46□□□□□ -1.05
SFP1YLR403W ERP3Q12403 225 aa8.46□□□□□ -1.05
SFP1YLR403W YIL134C-AQ45U18 67 aa8.46□□□□□ -1.05
SFP1YLR403W HBN1Q96VH4 193 aa8.46□□□□□ -1.05
SFP1YLR403W ACB1P31787 87 aa8.45□□□□□ -1.06
SFP1YLR403W AEP1P32493 518 aa8.45□□□□□ -1.06
SFP1YLR403W SRB5P32585 307 aa8.45□□□□□ -1.06
SFP1YLR403W RML2P32611 393 aa8.45□□□□□ -1.06
SFP1YLR403W PHD1P36093 366 aa8.45□□□□□ -1.06
SFP1YLR403W SEC24P40482 926 aaKnown RBP8.45□□□□□ -1.06
SFP1YLR403W LCB2P40970 561 aa8.45□□□□□ -1.06
SFP1YLR403W DPB11P47027 764 aaPredicted RBP8.45□□□□□ -1.06
SFP1YLR403W COS10P52924 374 aa8.45□□□□□ -1.06
SFP1YLR403W MDM34P53083 459 aa8.45□□□□□ -1.06
SFP1YLR403W CUS2P53830 285 aaPredicted RBP8.45□□□□□ -1.06
SFP1YLR403W ALG11P53954 548 aaKnown RBP8.45□□□□□ -1.06
SFP1YLR403W PEX29Q03370 554 aa8.45□□□□□ -1.06
SFP1YLR403W UPS3Q04006 179 aa8.45□□□□□ -1.06
SFP1YLR403W YDL199CQ12407 687 aa8.45□□□□□ -1.06
SFP1YLR403W SKS1Q12505 502 aa8.45□□□□□ -1.06
SFP1YLR403W CDC9P04819 755 aa8.45□□□□□ -1.06
SFP1YLR403W MSS18P08593 268 aa8.45□□□□□ -1.06
SFP1YLR403W ARO4P32449 370 aaKnown RBP8.45□□□□□ -1.06
SFP1YLR403W CAT2P32796 670 aaKnown RBP8.45□□□□□ -1.06
SFP1YLR403W UPS2P35200 230 aa8.45□□□□□ -1.06
SFP1YLR403W FIR1P40020 876 aa8.45□□□□□ -1.06
SFP1YLR403W GET2P40056 285 aa8.45□□□□□ -1.06
SFP1YLR403W SAM37P50110 327 aa8.45□□□□□ -1.06
SFP1YLR403W AVT4P50944 713 aa8.45□□□□□ -1.06
SFP1YLR403W SPP2Q02521 185 aa8.45□□□□□ -1.06
SFP1YLR403W ATC1Q04005 294 aa8.45□□□□□ -1.06
SFP1YLR403W TEN1Q07921 160 aa8.45□□□□□ -1.06
SFP1YLR403W APC1P53886 1748 aa8.44□□□□□ -1.06
SFP1YLR403W ARO2P28777 376 aaKnown RBP8.44□□□□□ -1.06
SFP1YLR403W TRS65P32893 560 aa8.44□□□□□ -1.06
SFP1YLR403W MNS1P32906 549 aa8.44□□□□□ -1.06
SFP1YLR403W YBR096WP38256 230 aa8.44□□□□□ -1.06
SFP1YLR403W MDM31P38880 579 aa8.44□□□□□ -1.06
SFP1YLR403W PUG1P40100 303 aa8.44□□□□□ -1.06
SFP1YLR403W PTR3P43606 678 aa8.44□□□□□ -1.06
SFP1YLR403W RMD8P43620 662 aa8.44□□□□□ -1.06
SFP1YLR403W YGL101WP53144 215 aa8.44□□□□□ -1.06
SFP1YLR403W MPP6P53725 186 aaPredicted RBP8.44□□□□□ -1.06
SFP1YLR403W CCE1Q03702 353 aa8.44□□□□□ -1.06
SFP1YLR403W AIM39Q08223 395 aa8.44□□□□□ -1.06
SFP1YLR403W ATG5Q12380 294 aa8.44□□□□□ -1.06
SFP1YLR403W MGT1P26188 188 aa8.44□□□□□ -1.06
SFP1YLR403W TRK2P28584 889 aa8.44□□□□□ -1.06
SFP1YLR403W BNA4P38169 460 aa8.44□□□□□ -1.06
SFP1YLR403W CHS7P38843 316 aa8.44□□□□□ -1.06
SFP1YLR403W ALP1P38971 573 aa8.44□□□□□ -1.06
SFP1YLR403W EAF5P39995 279 aa8.44□□□□□ -1.06
SFP1YLR403W NTA1P40354 457 aa8.44□□□□□ -1.06
SFP1YLR403W GPI14P47088 403 aaKnown RBP8.44□□□□□ -1.06
SFP1YLR403W YJR149WP47177 404 aa8.44□□□□□ -1.06
SFP1YLR403W HXT16P47185 567 aa8.44□□□□□ -1.06
SFP1YLR403W ATG4P53867 494 aa8.44□□□□□ -1.06
SFP1YLR403W YNL033WP53964 284 aa8.44□□□□□ -1.06
SFP1YLR403W YNL019CP53975 284 aa8.44□□□□□ -1.06
SFP1YLR403W YDR222WQ04925 415 aa8.44□□□□□ -1.06
SFP1YLR403W YET3Q07451 203 aa8.44□□□□□ -1.06
SFP1YLR403W RRI1Q12468 440 aa8.44□□□□□ -1.06
SFP1YLR403W TPI1P00942 248 aaKnown RBP8.43□□□□□ -1.06
SFP1YLR403W SGA1P08019 549 aa8.43□□□□□ -1.06
SFP1YLR403W HAP3P13434 144 aa8.43□□□□□ -1.06
SFP1YLR403W PPZ1P26570 692 aa8.43□□□□□ -1.06
SFP1YLR403W YKL075CP36083 450 aa8.43□□□□□ -1.06
SFP1YLR403W PRY2P36110 329 aa8.43□□□□□ -1.06
SFP1YLR403W PRP39P39682 629 aaKnown RBP8.43□□□□□ -1.06
SFP1YLR403W FMC1P40491 155 aa8.43□□□□□ -1.06
SFP1YLR403W KTR7P40504 517 aa8.43□□□□□ -1.06
SFP1YLR403W PRM2P40534 656 aa8.43□□□□□ -1.06
SFP1YLR403W FAA4P47912 694 aaKnown RBP8.43□□□□□ -1.06
SFP1YLR403W SKP1P52286 194 aa8.43□□□□□ -1.06
SFP1YLR403W SCW11P53189 542 aa8.43□□□□□ -1.06
SFP1YLR403W LSM7P53905 115 aaKnown RBP8.43□□□□□ -1.06
SFP1YLR403W TIM10P87108 93 aa8.43□□□□□ -1.06
SFP1YLR403W GPM3Q12326 303 aa8.43□□□□□ -1.06
SFP1YLR403W JLP1Q12358 412 aa8.43□□□□□ -1.06
SFP1YLR403W ISA2Q12425 185 aa8.43□□□□□ -1.06
SFP1YLR403W TAT1P38085 619 aa8.42□□□□□ -1.06
SFP1YLR403W SHR5P41912 237 aa8.42□□□□□ -1.06
SFP1YLR403W CSN12P47130 423 aa8.42□□□□□ -1.06
SFP1YLR403W CTR1P49573 406 aa8.42□□□□□ -1.06
SFP1YLR403W ERV29P53337 310 aa8.42□□□□□ -1.06
SFP1YLR403W MKC7P53379 596 aa8.42□□□□□ -1.06
SFP1YLR403W RSF1Q05043 376 aa8.42□□□□□ -1.06
SFP1YLR403W FSF1Q12029 327 aaKnown RBP8.42□□□□□ -1.06
SFP1YLR403W FCF2Q12035 217 aaPredicted RBP8.42□□□□□ -1.06
SFP1YLR403W YPL119C-AQ3E751 87 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 6.3 ms