RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C TIM21P53220 239 aa2.28□□□□□ -2.04
NYV1YLR093C YPL080CQ02826 108 aa2.28□□□□□ -2.04
NYV1YLR093C CWC21Q03375 135 aaKnown RBP2.28□□□□□ -2.04
NYV1YLR093C TRM82Q03774 444 aa2.28□□□□□ -2.04
NYV1YLR093C GMC2Q06201 188 aa2.28□□□□□ -2.04
NYV1YLR093C CTS2Q06350 511 aa2.28□□□□□ -2.04
NYV1YLR093C GPN3Q06543 272 aa2.28□□□□□ -2.04
NYV1YLR093C PBP4Q07362 185 aaKnown RBP2.28□□□□□ -2.04
NYV1YLR093C YLR012CQ07927 99 aa2.28□□□□□ -2.04
NYV1YLR093C SMC5Q08204 1093 aa2.28□□□□□ -2.04
NYV1YLR093C MED4Q12343 284 aa2.28□□□□□ -2.04
NYV1YLR093C EAF3Q12432 401 aa2.28□□□□□ -2.04
NYV1YLR093C PCL9Q12477 304 aa2.28□□□□□ -2.04
NYV1YLR093C RAD7P06779 565 aa2.27□□□□□ -2.05
NYV1YLR093C CWP1P28319 239 aa2.27□□□□□ -2.05
NYV1YLR093C MSN4P33749 630 aa2.27□□□□□ -2.05
NYV1YLR093C ANR2P36090 516 aaPredicted RBP2.27□□□□□ -2.05
NYV1YLR093C GPI18P38211 433 aa2.27□□□□□ -2.05
NYV1YLR093C YHR045WP38775 560 aa2.27□□□□□ -2.05
NYV1YLR093C FHL1P39521 936 aa2.27□□□□□ -2.05
NYV1YLR093C PTI1P39927 425 aaPredicted RBP2.27□□□□□ -2.05
NYV1YLR093C SHQ1P40486 507 aaPredicted RBP2.27□□□□□ -2.05
NYV1YLR093C YJL118WP47022 219 aa2.27□□□□□ -2.05
NYV1YLR093C KEL2P50090 882 aa2.27□□□□□ -2.05
NYV1YLR093C RTN1Q04947 295 aaKnown RBP2.27□□□□□ -2.05
NYV1YLR093C BER1Q06688 274 aaKnown RBP2.27□□□□□ -2.05
NYV1YLR093C YDL109CQ12103 647 aa2.27□□□□□ -2.05
NYV1YLR093C FCY22Q12119 530 aa2.27□□□□□ -2.05
NYV1YLR093C FRE8Q12209 686 aa2.27□□□□□ -2.05
NYV1YLR093C YDL199CQ12407 687 aa2.27□□□□□ -2.05
NYV1YLR093C REP1P03871 373 aa2.26□□□□□ -2.05
NYV1YLR093C HEM4P06174 275 aa2.26□□□□□ -2.05
NYV1YLR093C RPL31AP0C2H8 113 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C RPL23AP0CX41 137 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C RPL23BP0CX42 137 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C ITR2P30606 609 aa2.26□□□□□ -2.05
NYV1YLR093C NTG1P31378 399 aa2.26□□□□□ -2.05
NYV1YLR093C ZRT1P32804 376 aa2.26□□□□□ -2.05
NYV1YLR093C SKG6P32900 734 aaPredicted RBP2.26□□□□□ -2.05
NYV1YLR093C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
NYV1YLR093C SWD2P36104 329 aaPredicted RBP2.26□□□□□ -2.05
NYV1YLR093C ECM8P38246 354 aa2.26□□□□□ -2.05
NYV1YLR093C FMC1P40491 155 aa2.26□□□□□ -2.05
NYV1YLR093C YGL262WP53054 175 aa2.26□□□□□ -2.05
NYV1YLR093C SUR7P54003 302 aa2.26□□□□□ -2.05
NYV1YLR093C REX2P54964 269 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C SED5Q01590 340 aa2.26□□□□□ -2.05
NYV1YLR093C YPL077CQ02831 240 aa2.26□□□□□ -2.05
NYV1YLR093C IRC4Q03036 179 aa2.26□□□□□ -2.05
NYV1YLR093C YHC1Q05900 231 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C MFG1Q07684 458 aa2.26□□□□□ -2.05
NYV1YLR093C RDL2Q08742 149 aaKnown RBP2.26□□□□□ -2.05
NYV1YLR093C DDC1Q08949 612 aa2.26□□□□□ -2.05
NYV1YLR093C MCT1Q12283 360 aa2.26□□□□□ -2.05
NYV1YLR093C ATG31Q12421 196 aa2.26□□□□□ -2.05
NYV1YLR093C SSK22P25390 1331 aaPredicted RBP2.25□□□□□ -2.05
NYV1YLR093C RPS18AP0CX55 146 aaKnown RBP2.25□□□□□ -2.05
NYV1YLR093C RPS18BP0CX56 146 aaPredicted RBP2.25□□□□□ -2.05
NYV1YLR093C YSR3P23501 404 aa2.25□□□□□ -2.05
NYV1YLR093C RRT12P25381 491 aa2.25□□□□□ -2.05
NYV1YLR093C RPL16AP26784 199 aaKnown RBP2.25□□□□□ -2.05
NYV1YLR093C PMT2P31382 759 aa2.25□□□□□ -2.05
NYV1YLR093C MEI5P32489 222 aa2.25□□□□□ -2.05
NYV1YLR093C DOA4P32571 926 aa2.25□□□□□ -2.05
NYV1YLR093C PDC2P32896 925 aa2.25□□□□□ -2.05
NYV1YLR093C YKT6P36015 200 aaKnown RBP2.25□□□□□ -2.05
NYV1YLR093C MCH2P36032 473 aa2.25□□□□□ -2.05
NYV1YLR093C HEM14P40012 539 aa2.25□□□□□ -2.05
NYV1YLR093C YER085CP40058 173 aa2.25□□□□□ -2.05
NYV1YLR093C MAM33P40513 266 aa2.25□□□□□ -2.05
NYV1YLR093C GDS1P41913 522 aa2.25□□□□□ -2.05
NYV1YLR093C BNA6P43619 295 aa2.25□□□□□ -2.05
NYV1YLR093C MRX5P47007 382 aa2.25□□□□□ -2.05
NYV1YLR093C KTR6P54070 446 aa2.25□□□□□ -2.05
NYV1YLR093C PET117Q02771 107 aa2.25□□□□□ -2.05
NYV1YLR093C TLG1Q03322 224 aa2.25□□□□□ -2.05
NYV1YLR093C YMR209CQ03648 457 aa2.25□□□□□ -2.05
NYV1YLR093C SNX41Q04053 625 aa2.25□□□□□ -2.05
NYV1YLR093C TAF10Q12030 206 aa2.25□□□□□ -2.05
NYV1YLR093C ADF1Q2V2Q1 113 aa2.25□□□□□ -2.05
NYV1YLR093C ARG80P07249 177 aa2.24□□□□□ -2.05
NYV1YLR093C CDC42P19073 191 aa2.24□□□□□ -2.05
NYV1YLR093C MIR1P23641 311 aaKnown RBP2.24□□□□□ -2.05
NYV1YLR093C RPC37P36121 282 aa2.24□□□□□ -2.05
NYV1YLR093C MRPL27P36526 146 aaPredicted RBP2.24□□□□□ -2.05
NYV1YLR093C PRS4P38063 326 aaPredicted RBP2.24□□□□□ -2.05
NYV1YLR093C YPC1P38298 316 aa2.24□□□□□ -2.05
NYV1YLR093C LSM12P38828 187 aaKnown RBP2.24□□□□□ -2.05
NYV1YLR093C SOP4P39543 234 aaPredicted RBP2.24□□□□□ -2.05
NYV1YLR093C NPT1P39683 429 aaKnown RBP2.24□□□□□ -2.05
NYV1YLR093C COA1P40452 197 aa2.24□□□□□ -2.05
NYV1YLR093C HAC1P41546 238 aa2.24□□□□□ -2.05
NYV1YLR093C EGT2P42835 1041 aa2.24□□□□□ -2.05
NYV1YLR093C YFL012WP43580 148 aa2.24□□□□□ -2.05
NYV1YLR093C UBC13P52490 153 aa2.24□□□□□ -2.05
NYV1YLR093C CLD1P53264 445 aa2.24□□□□□ -2.05
NYV1YLR093C HCH1P53834 153 aa2.24□□□□□ -2.05
NYV1YLR093C DIA1P54005 336 aa2.24□□□□□ -2.05
NYV1YLR093C CDC14Q00684 551 aa2.24□□□□□ -2.05
NYV1YLR093C SCS7Q03529 384 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms