RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W GPN2Q08726 347 aaPredicted RBP4.49□□□□□ -1.69
LDB18YLL049W UAF30Q08747 228 aa4.49□□□□□ -1.69
LDB18YLL049W NIP7Q08962 181 aaKnown RBP4.49□□□□□ -1.69
LDB18YLL049W FRE8Q12209 686 aa4.49□□□□□ -1.69
LDB18YLL049W RNH203Q12338 110 aa4.49□□□□□ -1.69
LDB18YLL049W YKL018C-AQ3E7A7 99 aa4.49□□□□□ -1.69
LDB18YLL049W YOL087CQ99247 1116 aa4.49□□□□□ -1.69
LDB18YLL049W FSH3Q99369 266 aa4.49□□□□□ -1.69
LDB18YLL049W RAS2P01120 322 aaKnown RBP4.48□□□□□ -1.69
LDB18YLL049W ZWF1P11412 505 aaKnown RBP4.48□□□□□ -1.69
LDB18YLL049W RAP1P11938 827 aa4.48□□□□□ -1.69
LDB18YLL049W EXG1P23776 448 aaKnown RBP4.48□□□□□ -1.69
LDB18YLL049W MDH3P32419 343 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
LDB18YLL049W NUP2P32499 720 aa4.48□□□□□ -1.69
LDB18YLL049W TAT1P38085 619 aa4.48□□□□□ -1.69
LDB18YLL049W ECM34P38728 170 aa4.48□□□□□ -1.69
LDB18YLL049W YER121WP40076 114 aa4.48□□□□□ -1.69
LDB18YLL049W FAR3P46671 204 aa4.48□□□□□ -1.69
LDB18YLL049W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
LDB18YLL049W ASM4Q05166 528 aa4.48□□□□□ -1.69
LDB18YLL049W MUM3Q08750 479 aa4.48□□□□□ -1.69
LDB18YLL049W YDL109CQ12103 647 aa4.48□□□□□ -1.69
LDB18YLL049W MED2Q12124 431 aa4.48□□□□□ -1.69
LDB18YLL049W YOR214CQ12282 236 aa4.48□□□□□ -1.69
LDB18YLL049W YLR122CQ12312 125 aa4.48□□□□□ -1.69
LDB18YLL049W CYC1P00044 109 aaPredicted RBP4.47□□□□□ -1.69
LDB18YLL049W GCD1P09032 578 aaPredicted RBP4.47□□□□□ -1.69
LDB18YLL049W RVS161P25343 265 aaKnown RBP4.47□□□□□ -1.69
LDB18YLL049W PFK26P40433 827 aaKnown RBP4.47□□□□□ -1.69
LDB18YLL049W URM1P40554 99 aaPredicted RBP4.47□□□□□ -1.69
LDB18YLL049W ARC1P46672 376 aaKnown RBP4.47□□□□□ -1.69
LDB18YLL049W SNF12P53628 566 aa4.47□□□□□ -1.69
LDB18YLL049W EAF7P53911 425 aaKnown RBP4.47□□□□□ -1.69
LDB18YLL049W YNL046WP53956 172 aa4.47□□□□□ -1.69
LDB18YLL049W YKU80Q04437 629 aa4.47□□□□□ -1.69
LDB18YLL049W TPO3Q06451 622 aa4.47□□□□□ -1.69
LDB18YLL049W IRC19Q07843 230 aa4.47□□□□□ -1.69
LDB18YLL049W VHS3Q08438 674 aa4.47□□□□□ -1.69
LDB18YLL049W FIT3Q08907 204 aa4.47□□□□□ -1.69
LDB18YLL049W RPP2AP05319 106 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W SUI3P09064 285 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W RPS8AP0CX39 200 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W RPS8BP0CX40 200 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W APA2P22108 325 aa4.46□□□□□ -1.7
LDB18YLL049W SED4P25365 1065 aa4.46□□□□□ -1.7
LDB18YLL049W SPP381P38282 291 aaPredicted RBP4.46□□□□□ -1.7
LDB18YLL049W SWD1P39706 426 aa4.46□□□□□ -1.7
LDB18YLL049W YNL195CP40168 261 aa4.46□□□□□ -1.7
LDB18YLL049W GAB1P41733 394 aa4.46□□□□□ -1.7
LDB18YLL049W YHC3P47040 408 aa4.46□□□□□ -1.7
LDB18YLL049W LIA1P47120 325 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W TOS2P50078 622 aa4.46□□□□□ -1.7
LDB18YLL049W COS1P53822 381 aa4.46□□□□□ -1.7
LDB18YLL049W ASI2P53895 289 aa4.46□□□□□ -1.7
LDB18YLL049W YMR279CQ03263 540 aa4.46□□□□□ -1.7
LDB18YLL049W YLR413WQ06689 675 aa4.46□□□□□ -1.7
LDB18YLL049W STP4Q07351 490 aa4.46□□□□□ -1.7
LDB18YLL049W BRX1Q08235 291 aaKnown RBP4.46□□□□□ -1.7
LDB18YLL049W BTS1Q12051 335 aa4.46□□□□□ -1.7
LDB18YLL049W SNF8Q12483 233 aa4.46□□□□□ -1.7
LDB18YLL049W YOR343CQ12484 108 aa4.46□□□□□ -1.7
LDB18YLL049W PUT2P07275 575 aa4.45□□□□□ -1.7
LDB18YLL049W RPS23AP0CX29 145 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W RPS23BP0CX30 145 aa4.45□□□□□ -1.7
LDB18YLL049W YER190C-BP0CX94 160 aa4.45□□□□□ -1.7
LDB18YLL049W YEL077W-AP0CX95 160 aa4.45□□□□□ -1.7
LDB18YLL049W YGR296C-BP0CX96 160 aa4.45□□□□□ -1.7
LDB18YLL049W YPL283W-BP0CX97 160 aa4.45□□□□□ -1.7
LDB18YLL049W YPR204C-AP0CX98 160 aa4.45□□□□□ -1.7
LDB18YLL049W YFL068WP0CX99 160 aa4.45□□□□□ -1.7
LDB18YLL049W YLL066W-AP0CY00 160 aa4.45□□□□□ -1.7
LDB18YLL049W YLL067W-AP0CY01 160 aa4.45□□□□□ -1.7
LDB18YLL049W SEC12P11655 471 aa4.45□□□□□ -1.7
LDB18YLL049W RER1P25560 188 aa4.45□□□□□ -1.7
LDB18YLL049W YEL043WP32618 956 aa4.45□□□□□ -1.7
LDB18YLL049W CLB6P32943 380 aa4.45□□□□□ -1.7
LDB18YLL049W SPT10P35208 640 aa4.45□□□□□ -1.7
LDB18YLL049W PRY2P36110 329 aa4.45□□□□□ -1.7
LDB18YLL049W VPS41P38959 992 aa4.45□□□□□ -1.7
LDB18YLL049W AGE2P40529 298 aa4.45□□□□□ -1.7
LDB18YLL049W UBC13P52490 153 aa4.45□□□□□ -1.7
LDB18YLL049W RBG2P53295 368 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W COS6P53344 381 aa4.45□□□□□ -1.7
LDB18YLL049W MEP3P53390 489 aa4.45□□□□□ -1.7
LDB18YLL049W ARC35P53731 342 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W APJ1P53940 528 aa4.45□□□□□ -1.7
LDB18YLL049W VPS71Q03433 280 aa4.45□□□□□ -1.7
LDB18YLL049W TVP15Q03860 143 aa4.45□□□□□ -1.7
LDB18YLL049W YHC1Q05900 231 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W ARV1Q06541 321 aa4.45□□□□□ -1.7
LDB18YLL049W NDL1Q06568 189 aa4.45□□□□□ -1.7
LDB18YLL049W YEH2Q07950 538 aa4.45□□□□□ -1.7
LDB18YLL049W NOP12Q08208 459 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W UIP4Q08926 304 aa4.45□□□□□ -1.7
LDB18YLL049W RTC5Q12108 567 aaKnown RBP4.45□□□□□ -1.7
LDB18YLL049W RLM1Q12224 676 aa4.45□□□□□ -1.7
LDB18YLL049W YHR214C-EQ8TGK0 99 aa4.45□□□□□ -1.7
LDB18YLL049W CDC8P00572 216 aa4.44□□□□□ -1.7
LDB18YLL049W RPS16AP0CX51 143 aaKnown RBP4.44□□□□□ -1.7
LDB18YLL049W RPS16BP0CX52 143 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms