RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W PGA1P53896 198 aa10.46□□□□□ -0.73
TCD2YKL027W SRP1Q02821 542 aaKnown RBP10.46□□□□□ -0.73
TCD2YKL027W FIN1Q03898 291 aa10.46□□□□□ -0.73
TCD2YKL027W YMR087WQ04299 284 aa10.46□□□□□ -0.73
TCD2YKL027W YPL272CQ08984 517 aa10.46□□□□□ -0.73
TCD2YKL027W PNS1Q12412 539 aa10.46□□□□□ -0.73
TCD2YKL027W Q0144Q9ZZW2 109 aa10.46□□□□□ -0.73
TCD2YKL027W YAL064W-BO13512 126 aa10.45□□□□□ -0.74
TCD2YKL027W MET17P06106 444 aa10.45□□□□□ -0.74
TCD2YKL027W UTR1P21373 530 aa10.45□□□□□ -0.74
TCD2YKL027W MDH3P32419 343 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
TCD2YKL027W SUR1P33300 382 aa10.45□□□□□ -0.74
TCD2YKL027W CHK1P38147 527 aa10.45□□□□□ -0.74
TCD2YKL027W YHR035WP38769 630 aa10.45□□□□□ -0.74
TCD2YKL027W POP1P41812 875 aa10.45□□□□□ -0.74
TCD2YKL027W VNX1P42839 908 aa10.45□□□□□ -0.74
TCD2YKL027W EMG1Q06287 252 aaKnown RBP10.45□□□□□ -0.74
TCD2YKL027W HRT1Q08273 121 aa10.45□□□□□ -0.74
TCD2YKL027W VCX1Q99385 411 aa10.45□□□□□ -0.74
TCD2YKL027W CTA1P15202 515 aa10.44□□□□□ -0.74
TCD2YKL027W PAD1P33751 242 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
TCD2YKL027W BAP2P38084 609 aa10.44□□□□□ -0.74
TCD2YKL027W BUR6P40096 142 aa10.44□□□□□ -0.74
TCD2YKL027W HIS6P40545 261 aa10.44□□□□□ -0.74
TCD2YKL027W NIT2P47016 307 aa10.44□□□□□ -0.74
TCD2YKL027W YGR066CP53242 292 aa10.44□□□□□ -0.74
TCD2YKL027W RRN9P53437 365 aa10.44□□□□□ -0.74
TCD2YKL027W VBA4Q04602 768 aaKnown RBP10.44□□□□□ -0.74
TCD2YKL027W YPR147CQ06522 304 aaKnown RBP10.44□□□□□ -0.74
TCD2YKL027W YDL218WQ07629 317 aa10.44□□□□□ -0.74
TCD2YKL027W FLO9P39712 1322 aa10.44□□□□□ -0.74
TCD2YKL027W YBR056W-AI2HB52 66 aa10.43□□□□□ -0.74
TCD2YKL027W PBS2P08018 668 aa10.43□□□□□ -0.74
TCD2YKL027W SEC12P11655 471 aa10.43□□□□□ -0.74
TCD2YKL027W ENA1P13587 1091 aa10.43□□□□□ -0.74
TCD2YKL027W MRPS28P21771 286 aa10.43□□□□□ -0.74
TCD2YKL027W NDC1P32500 655 aa10.43□□□□□ -0.74
TCD2YKL027W MRPL16P38064 232 aa10.43□□□□□ -0.74
TCD2YKL027W VBA2P38358 474 aaKnown RBP10.43□□□□□ -0.74
TCD2YKL027W RPN14P53196 417 aa10.43□□□□□ -0.74
TCD2YKL027W ENA2Q01896 1091 aa10.43□□□□□ -0.74
TCD2YKL027W FDC1Q03034 503 aa10.43□□□□□ -0.74
TCD2YKL027W GSH2Q08220 491 aa10.43□□□□□ -0.74
TCD2YKL027W ENA5Q12691 1091 aa10.43□□□□□ -0.74
TCD2YKL027W YGR161W-CQ3E744 92 aa10.43□□□□□ -0.74
TCD2YKL027W CBP6P07253 162 aaPredicted RBP10.42□□□□□ -0.74
TCD2YKL027W MET2P08465 486 aa10.42□□□□□ -0.74
TCD2YKL027W STE12P13574 688 aa10.42□□□□□ -0.74
TCD2YKL027W GAS1P22146 559 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W AIM10P39965 576 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W RFC4P40339 323 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W YIL169CP40442 995 aa10.42□□□□□ -0.74
TCD2YKL027W PRY1P47032 299 aa10.42□□□□□ -0.74
TCD2YKL027W RBL2P48606 106 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W NUP49Q02199 472 aa10.42□□□□□ -0.74
TCD2YKL027W NUP116Q02630 1113 aa10.42□□□□□ -0.74
TCD2YKL027W YMR315WQ04869 349 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W YLR346CQ06139 101 aa10.42□□□□□ -0.74
TCD2YKL027W NEJ1Q06148 342 aa10.42□□□□□ -0.74
TCD2YKL027W NIP7Q08962 181 aaKnown RBP10.42□□□□□ -0.74
TCD2YKL027W RAS1P01119 309 aa10.41□□□□□ -0.74
TCD2YKL027W MDH2P22133 377 aa10.41□□□□□ -0.74
TCD2YKL027W RPS5P26783 225 aaKnown RBP10.41□□□□□ -0.74
TCD2YKL027W ERG9P29704 444 aa10.41□□□□□ -0.74
TCD2YKL027W MAL32P38158 584 aa10.41□□□□□ -0.74
TCD2YKL027W MAL12P53341 584 aa10.41□□□□□ -0.74
TCD2YKL027W APM1Q00776 475 aaPredicted RBP10.41□□□□□ -0.74
TCD2YKL027W HRI1Q05905 244 aaKnown RBP10.41□□□□□ -0.74
TCD2YKL027W PHO2P07269 559 aa10.4□□□□□ -0.74
TCD2YKL027W YGL041W-AP0C5N3 154 aa10.4□□□□□ -0.74
TCD2YKL027W MDH1P17505 334 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
TCD2YKL027W YCL002CP25565 263 aa10.4□□□□□ -0.74
TCD2YKL027W THI4P32318 326 aa10.4□□□□□ -0.74
TCD2YKL027W MGE1P38523 228 aa10.4□□□□□ -0.74
TCD2YKL027W PHO90P39535 881 aa10.4□□□□□ -0.74
TCD2YKL027W IES5P40060 125 aa10.4□□□□□ -0.74
TCD2YKL027W NAS2P40555 220 aa10.4□□□□□ -0.74
TCD2YKL027W SFH5P47008 294 aa10.4□□□□□ -0.74
TCD2YKL027W BRR6P53062 197 aa10.4□□□□□ -0.74
TCD2YKL027W MRPL51Q06090 140 aaPredicted RBP10.4□□□□□ -0.74
TCD2YKL027W GAS2Q06135 555 aa10.4□□□□□ -0.74
TCD2YKL027W TAZ1Q06510 381 aa10.4□□□□□ -0.74
TCD2YKL027W FPS1P23900 669 aa10.39□□□□□ -0.75
TCD2YKL027W YME2P32843 850 aa10.39□□□□□ -0.75
TCD2YKL027W COS9P36034 407 aa10.39□□□□□ -0.75
TCD2YKL027W YKR015CP36111 568 aa10.39□□□□□ -0.75
TCD2YKL027W AMN1P38285 549 aaPredicted RBP10.39□□□□□ -0.75
TCD2YKL027W BSC5P53755 489 aa10.39□□□□□ -0.75
TCD2YKL027W NOG1Q02892 647 aaKnown RBP10.39□□□□□ -0.75
TCD2YKL027W YDR179W-AQ03983 463 aa10.39□□□□□ -0.75
TCD2YKL027W YDL176WQ12027 708 aa10.39□□□□□ -0.75
TCD2YKL027W MCM10P32354 571 aa10.38□□□□□ -0.75
TCD2YKL027W ECT1P33412 323 aa10.38□□□□□ -0.75
TCD2YKL027W SHE1P38200 338 aa10.38□□□□□ -0.75
TCD2YKL027W DDI1P40087 428 aa10.38□□□□□ -0.75
TCD2YKL027W LYS5P50113 272 aa10.38□□□□□ -0.75
TCD2YKL027W SOK2P53438 785 aaPredicted RBP10.38□□□□□ -0.75
TCD2YKL027W YLR173WQ06247 608 aa10.38□□□□□ -0.75
TCD2YKL027W YDL114WQ07530 308 aa10.38□□□□□ -0.75
TCD2YKL027W BLM10P43583 2143 aa10.38□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms