RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C PSY3Q12318 242 aa2.68□□□□□ -1.98
CUP1-2YHR055C SAL1D6W196 494 aa2.67□□□□□ -1.98
CUP1-2YHR055C RNR2P09938 399 aaKnown RBP2.67□□□□□ -1.98
CUP1-2YHR055C SPS100P13130 326 aa2.67□□□□□ -1.98
CUP1-2YHR055C DSE1P40077 573 aa2.67□□□□□ -1.98
CUP1-2YHR055C YPL245WQ12179 454 aaKnown RBP2.67□□□□□ -1.98
CUP1-2YHR055C PRP46Q12417 451 aaPredicted RBP2.67□□□□□ -1.98
CUP1-2YHR055C RPB9P27999 122 aa2.66□□□□□ -1.98
CUP1-2YHR055C TFC7Q12415 435 aa2.66□□□□□ -1.98
CUP1-2YHR055C ERD1P16151 362 aa2.65□□□□□ -1.99
CUP1-2YHR055C HPR1P17629 752 aaKnown RBP2.65□□□□□ -1.99
CUP1-2YHR055C INO2P26798 304 aa2.65□□□□□ -1.99
CUP1-2YHR055C BUD2P33314 1104 aa2.65□□□□□ -1.99
CUP1-2YHR055C UIP5P36137 443 aa2.65□□□□□ -1.99
CUP1-2YHR055C YJL144WP47009 104 aa2.65□□□□□ -1.99
CUP1-2YHR055C YGR168CP53293 376 aa2.65□□□□□ -1.99
CUP1-2YHR055C CSI1Q04368 295 aa2.65□□□□□ -1.99
CUP1-2YHR055C YLR012CQ07927 99 aa2.65□□□□□ -1.99
CUP1-2YHR055C TRM10Q12400 293 aa2.65□□□□□ -1.99
CUP1-2YHR055C RPS23AP0CX29 145 aaKnown RBP2.64□□□□□ -1.99
CUP1-2YHR055C RPS23BP0CX30 145 aa2.64□□□□□ -1.99
CUP1-2YHR055C MRPL20P22354 195 aaPredicted RBP2.64□□□□□ -1.99
CUP1-2YHR055C ECM14P38836 430 aa2.64□□□□□ -1.99
CUP1-2YHR055C LIN1P38852 340 aaPredicted RBP2.64□□□□□ -1.99
CUP1-2YHR055C ASP1P38986 381 aaPredicted RBP2.64□□□□□ -1.99
CUP1-2YHR055C MIM1Q08176 113 aa2.64□□□□□ -1.99
CUP1-2YHR055C DAL5P15365 543 aa2.63□□□□□ -1.99
CUP1-2YHR055C CSE1P33307 960 aa2.63□□□□□ -1.99
CUP1-2YHR055C BUD13P46947 266 aaPredicted RBP2.63□□□□□ -1.99
CUP1-2YHR055C FYV8P46949 817 aaKnown RBP2.63□□□□□ -1.99
CUP1-2YHR055C IRC4Q03036 179 aa2.63□□□□□ -1.99
CUP1-2YHR055C HRT1Q08273 121 aa2.63□□□□□ -1.99
CUP1-2YHR055C VIK1Q12045 647 aa2.63□□□□□ -1.99
CUP1-2YHR055C YPR063CQ12160 140 aa2.63□□□□□ -1.99
CUP1-2YHR055C CBP2P03874 630 aaPredicted RBP2.62□□□□□ -1.99
CUP1-2YHR055C RPL18AP0CX49 186 aaKnown RBP2.62□□□□□ -1.99
CUP1-2YHR055C RPL18BP0CX50 186 aaKnown RBP2.62□□□□□ -1.99
CUP1-2YHR055C GAL3P13045 520 aa2.62□□□□□ -1.99
CUP1-2YHR055C YNR066CP53752 436 aa2.62□□□□□ -1.99
CUP1-2YHR055C YPL264CQ08980 353 aa2.62□□□□□ -1.99
CUP1-2YHR055C SUR1P33300 382 aa2.61□□□□□ -1.99
CUP1-2YHR055C TKL2P33315 681 aa2.61□□□□□ -1.99
CUP1-2YHR055C PET8P38921 284 aa2.61□□□□□ -1.99
CUP1-2YHR055C EDC2P40023 145 aaPredicted RBP2.61□□□□□ -1.99
CUP1-2YHR055C UBX2Q04228 584 aa2.61□□□□□ -1.99
CUP1-2YHR055C SGT2Q12118 346 aaKnown RBP2.61□□□□□ -1.99
CUP1-2YHR055C IES3Q12345 250 aa2.61□□□□□ -1.99
CUP1-2YHR055C ERP3Q12403 225 aa2.61□□□□□ -1.99
CUP1-2YHR055C ZRT1P32804 376 aa2.6□□□□□ -1.99
CUP1-2YHR055C MED8P38304 223 aa2.6□□□□□ -1.99
CUP1-2YHR055C PES4P39684 611 aa2.6□□□□□ -1.99
CUP1-2YHR055C UTP25P40498 721 aaKnown RBP2.6□□□□□ -1.99
CUP1-2YHR055C NAS2P40555 220 aa2.6□□□□□ -1.99
CUP1-2YHR055C SHE4P51534 789 aa2.6□□□□□ -1.99
CUP1-2YHR055C YDR114CQ04597 100 aa2.6□□□□□ -1.99
CUP1-2YHR055C ARO4P32449 370 aaKnown RBP2.59□□□□□ -1.99
CUP1-2YHR055C YHR035WP38769 630 aa2.59□□□□□ -1.99
CUP1-2YHR055C CAJ1P39101 391 aa2.59□□□□□ -1.99
CUP1-2YHR055C SOP4P39543 234 aaPredicted RBP2.59□□□□□ -1.99
CUP1-2YHR055C ECO1P43605 281 aa2.59□□□□□ -1.99
CUP1-2YHR055C SNX41Q04053 625 aa2.59□□□□□ -1.99
CUP1-2YHR055C GTO3Q04806 366 aa2.59□□□□□ -1.99
CUP1-2YHR055C YDR222WQ04925 415 aa2.59□□□□□ -1.99
CUP1-2YHR055C UTP23Q12339 254 aaKnown RBP2.59□□□□□ -1.99
CUP1-2YHR055C YPS1P32329 569 aa2.58□□□□□ -2
CUP1-2YHR055C ALK2P32789 676 aaPredicted RBP2.58□□□□□ -2
CUP1-2YHR055C MRPL6P32904 214 aa2.58□□□□□ -2
CUP1-2YHR055C PPQ1P32945 549 aa2.58□□□□□ -2
CUP1-2YHR055C AIM29P36154 155 aa2.58□□□□□ -2
CUP1-2YHR055C INA22P40576 216 aa2.58□□□□□ -2
CUP1-2YHR055C YNL040WP53960 456 aaPredicted RBP2.58□□□□□ -2
CUP1-2YHR055C YPL080CQ02826 108 aa2.58□□□□□ -2
CUP1-2YHR055C ARC18Q05933 178 aaKnown RBP2.58□□□□□ -2
CUP1-2YHR055C YOR292CQ08743 309 aa2.58□□□□□ -2
CUP1-2YHR055C SAM4Q08985 325 aaKnown RBP2.58□□□□□ -2
CUP1-2YHR055C LAG2Q92325 660 aa2.58□□□□□ -2
CUP1-2YHR055C CDC37P06101 506 aaKnown RBP2.57□□□□□ -2
CUP1-2YHR055C YFL040WP43562 540 aa2.57□□□□□ -2
CUP1-2YHR055C YFR045WP43617 309 aa2.57□□□□□ -2
CUP1-2YHR055C HSH155P49955 971 aaKnown RBP2.57□□□□□ -2
CUP1-2YHR055C YGL088WP53151 121 aa2.57□□□□□ -2
CUP1-2YHR055C ACT1P60010 375 aaKnown RBP2.57□□□□□ -2
CUP1-2YHR055C YPL113CQ02961 396 aa2.57□□□□□ -2
CUP1-2YHR055C SEC13Q04491 297 aaKnown RBP2.57□□□□□ -2
CUP1-2YHR055C DXO1Q06349 442 aa2.57□□□□□ -2
CUP1-2YHR055C RLP24Q07915 199 aaKnown RBP2.57□□□□□ -2
CUP1-2YHR055C TDH3P00359 332 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
CUP1-2YHR055C DAL81P21657 970 aa2.56□□□□□ -2
CUP1-2YHR055C IFM1P25038 676 aa2.56□□□□□ -2
CUP1-2YHR055C VPH2P32341 215 aa2.56□□□□□ -2
CUP1-2YHR055C UTR5P32630 166 aa2.56□□□□□ -2
CUP1-2YHR055C SMC2P38989 1170 aaKnown RBP2.56□□□□□ -2
CUP1-2YHR055C END3P39013 349 aa2.56□□□□□ -2
CUP1-2YHR055C YDR286CQ05530 114 aa2.56□□□□□ -2
CUP1-2YHR055C PGC1Q08959 321 aa2.56□□□□□ -2
CUP1-2YHR055C YPR1Q12458 312 aa2.56□□□□□ -2
CUP1-2YHR055C VMA2P16140 517 aaKnown RBP2.55□□□□□ -2
CUP1-2YHR055C SDH4P37298 181 aa2.55□□□□□ -2
CUP1-2YHR055C OKP1P53298 406 aa2.55□□□□□ -2
CUP1-2YHR055C YGR266WP53326 701 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms