RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W SMD1Q02260 146 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W YLR297WQ05899 129 aa0.98□□□□□ -2.25
SLD3YGL113W YPR195CQ06594 109 aa0.98□□□□□ -2.25
SLD3YGL113W RLP24Q07915 199 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W SGT2Q12118 346 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W YPR063CQ12160 140 aa0.98□□□□□ -2.25
SLD3YGL113W YDR018CQ12185 396 aa0.98□□□□□ -2.25
SLD3YGL113W NFI1Q12216 726 aa0.98□□□□□ -2.25
SLD3YGL113W RRP42Q12277 265 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W YIL002W-AQ3E7Z5 69 aa0.98□□□□□ -2.25
SLD3YGL113W REP1P03871 373 aa0.98□□□□□ -2.25
SLD3YGL113W RAD1P06777 1100 aa0.98□□□□□ -2.25
SLD3YGL113W STE3P06783 470 aa0.98□□□□□ -2.25
SLD3YGL113W GCD2P12754 651 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W ERD1P16151 362 aa0.98□□□□□ -2.25
SLD3YGL113W CPT1P17898 393 aa0.98□□□□□ -2.25
SLD3YGL113W DAP2P18962 818 aa0.98□□□□□ -2.25
SLD3YGL113W SAG1P20840 650 aa0.98□□□□□ -2.25
SLD3YGL113W RPL5P26321 297 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W YMR262WP38430 313 aa0.98□□□□□ -2.25
SLD3YGL113W ECM14P38836 430 aa0.98□□□□□ -2.25
SLD3YGL113W LIN1P38852 340 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W SSO2P39926 295 aa0.98□□□□□ -2.25
SLD3YGL113W EDC2P40023 145 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W ASG7P46993 209 aa0.98□□□□□ -2.25
SLD3YGL113W CPR7P47103 393 aa0.98□□□□□ -2.25
SLD3YGL113W YGR168CP53293 376 aa0.98□□□□□ -2.25
SLD3YGL113W ARP5P53946 755 aa0.98□□□□□ -2.25
SLD3YGL113W DIA1P54005 336 aa0.98□□□□□ -2.25
SLD3YGL113W RTC5Q12108 567 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W RFM1Q12192 310 aa0.98□□□□□ -2.25
SLD3YGL113W TIR4Q12218 487 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W UTP23Q12339 254 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W PFK27Q12471 397 aaPredicted RBP0.98□□□□□ -2.25
SLD3YGL113W DFM1Q12743 341 aaKnown RBP0.98□□□□□ -2.25
SLD3YGL113W LAG2Q92325 660 aa0.98□□□□□ -2.25
SLD3YGL113W YOL085CQ99345 113 aa0.98□□□□□ -2.25
SLD3YGL113W CCH1P50077 2039 aa0.97□□□□□ -2.25
SLD3YGL113W UTR1P21373 530 aa0.97□□□□□ -2.25
SLD3YGL113W KRR1P25586 316 aaPredicted RBP0.97□□□□□ -2.25
SLD3YGL113W POT1P27796 417 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
SLD3YGL113W DBP7P36120 742 aaKnown RBP0.97□□□□□ -2.25
SLD3YGL113W IML3P38265 245 aa0.97□□□□□ -2.25
SLD3YGL113W YHL044WP38727 235 aa0.97□□□□□ -2.25
SLD3YGL113W RRG9P40156 214 aa0.97□□□□□ -2.25
SLD3YGL113W COG7P53195 279 aa0.97□□□□□ -2.25
SLD3YGL113W CAX4P53223 239 aa0.97□□□□□ -2.25
SLD3YGL113W VOA1P53262 265 aa0.97□□□□□ -2.25
SLD3YGL113W SAM4Q08985 325 aaKnown RBP0.97□□□□□ -2.25
SLD3YGL113W TAF10Q12030 206 aa0.97□□□□□ -2.25
SLD3YGL113W RPN6Q12377 434 aa0.97□□□□□ -2.25
SLD3YGL113W ERP3Q12403 225 aa0.97□□□□□ -2.25
SLD3YGL113W YPR1Q12458 312 aa0.97□□□□□ -2.25
SLD3YGL113W SPO24Q3E752 67 aa0.97□□□□□ -2.25
SLD3YGL113W CBP2P03874 630 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W YOL163WP0CF20 169 aa0.96□□□□□ -2.26
SLD3YGL113W GAL3P13045 520 aa0.96□□□□□ -2.26
SLD3YGL113W OSM1P21375 501 aaKnown RBP0.96□□□□□ -2.26
SLD3YGL113W OPI1P21957 404 aa0.96□□□□□ -2.26
SLD3YGL113W RPL16BP26785 198 aaKnown RBP0.96□□□□□ -2.26
SLD3YGL113W ZRT1P32804 376 aa0.96□□□□□ -2.26
SLD3YGL113W POP2P39008 433 aa0.96□□□□□ -2.26
SLD3YGL113W END3P39013 349 aa0.96□□□□□ -2.26
SLD3YGL113W YIA6P40556 373 aa0.96□□□□□ -2.26
SLD3YGL113W YFL040WP43562 540 aa0.96□□□□□ -2.26
SLD3YGL113W FMP48P53233 369 aa0.96□□□□□ -2.26
SLD3YGL113W OKP1P53298 406 aa0.96□□□□□ -2.26
SLD3YGL113W YPL113CQ02961 396 aa0.96□□□□□ -2.26
SLD3YGL113W INP1Q03694 420 aa0.96□□□□□ -2.26
SLD3YGL113W SIA1Q12212 622 aa0.96□□□□□ -2.26
SLD3YGL113W PRP46Q12417 451 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W DCP1Q12517 231 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W TDH3P00359 332 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
SLD3YGL113W STF1P01098 86 aa0.96□□□□□ -2.26
SLD3YGL113W TPM1P17536 199 aaKnown RBP0.96□□□□□ -2.26
SLD3YGL113W TRX1P22217 103 aaKnown RBP0.96□□□□□ -2.26
SLD3YGL113W MRPL20P22354 195 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W RSA4P25382 515 aaKnown RBP0.96□□□□□ -2.26
SLD3YGL113W PTK1P36002 662 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W SPT8P38915 602 aa0.96□□□□□ -2.26
SLD3YGL113W SOP4P39543 234 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W HEM14P40012 539 aa0.96□□□□□ -2.26
SLD3YGL113W YCH1P42937 148 aa0.96□□□□□ -2.26
SLD3YGL113W YFL064CP43540 174 aa0.96□□□□□ -2.26
SLD3YGL113W YJL144WP47009 104 aa0.96□□□□□ -2.26
SLD3YGL113W SHE4P51534 789 aa0.96□□□□□ -2.26
SLD3YGL113W YGR266WP53326 701 aa0.96□□□□□ -2.26
SLD3YGL113W YNL040WP53960 456 aaPredicted RBP0.96□□□□□ -2.26
SLD3YGL113W YPL077CQ02831 240 aa0.96□□□□□ -2.26
SLD3YGL113W SCS7Q03529 384 aa0.96□□□□□ -2.26
SLD3YGL113W SNX41Q04053 625 aa0.96□□□□□ -2.26
SLD3YGL113W PEX30Q06169 523 aa0.96□□□□□ -2.26
SLD3YGL113W BCP1Q06338 283 aa0.96□□□□□ -2.26
SLD3YGL113W GPN3Q06543 272 aa0.96□□□□□ -2.26
SLD3YGL113W PSY3Q12318 242 aa0.96□□□□□ -2.26
SLD3YGL113W IES3Q12345 250 aa0.96□□□□□ -2.26
SLD3YGL113W MRX4Q12467 430 aa0.96□□□□□ -2.26
SLD3YGL113W YPR064WQ12492 139 aa0.96□□□□□ -2.26
SLD3YGL113W DAL5P15365 543 aa0.95□□□□□ -2.26
SLD3YGL113W RRT12P25381 491 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms