RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C FMP42Q04991 504 aa9.67□□□□□ -0.86
VPS60YDR486C UTP21Q06078 939 aaPredicted RBP9.67□□□□□ -0.86
VPS60YDR486C TAZ1Q06510 381 aa9.67□□□□□ -0.86
VPS60YDR486C MCM21Q06675 368 aa9.67□□□□□ -0.86
VPS60YDR486C IRC19Q07843 230 aa9.67□□□□□ -0.86
VPS60YDR486C YRM1Q12340 786 aa9.67□□□□□ -0.86
VPS60YDR486C YOR343CQ12484 108 aa9.67□□□□□ -0.86
VPS60YDR486C CTA1P15202 515 aa9.66□□□□□ -0.86
VPS60YDR486C GAS1P22146 559 aaKnown RBP9.66□□□□□ -0.86
VPS60YDR486C ARO7P32178 256 aa9.66□□□□□ -0.86
VPS60YDR486C NUD1P32336 851 aa9.66□□□□□ -0.86
VPS60YDR486C PAD1P33751 242 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
VPS60YDR486C MAL32P38158 584 aa9.66□□□□□ -0.86
VPS60YDR486C HIS6P40545 261 aa9.66□□□□□ -0.86
VPS60YDR486C MAL12P53341 584 aa9.66□□□□□ -0.86
VPS60YDR486C MIX14Q04341 121 aa9.66□□□□□ -0.86
VPS60YDR486C YLR346CQ06139 101 aa9.66□□□□□ -0.86
VPS60YDR486C YOL024WQ08172 172 aa9.66□□□□□ -0.86
VPS60YDR486C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
VPS60YDR486C FPS1P23900 669 aa9.65□□□□□ -0.86
VPS60YDR486C KAE1P36132 386 aa9.65□□□□□ -0.86
VPS60YDR486C YPK3P38070 525 aa9.65□□□□□ -0.86
VPS60YDR486C REE1P40893 198 aa9.65□□□□□ -0.86
VPS60YDR486C HOL1P53389 586 aa9.65□□□□□ -0.86
VPS60YDR486C ATG4P53867 494 aa9.65□□□□□ -0.86
VPS60YDR486C GAL83Q04739 417 aa9.65□□□□□ -0.86
VPS60YDR486C YMR315WQ04869 349 aaKnown RBP9.65□□□□□ -0.86
VPS60YDR486C YPR109WQ06104 294 aa9.65□□□□□ -0.86
VPS60YDR486C RDL2Q08742 149 aaKnown RBP9.65□□□□□ -0.86
VPS60YDR486C FRE5Q08908 694 aa9.65□□□□□ -0.86
VPS60YDR486C THP3Q12049 470 aaKnown RBP9.65□□□□□ -0.86
VPS60YDR486C IES3Q12345 250 aa9.65□□□□□ -0.86
VPS60YDR486C KIN28P06242 306 aa9.64□□□□□ -0.87
VPS60YDR486C PEP4P07267 405 aaKnown RBP9.64□□□□□ -0.87
VPS60YDR486C SEC12P11655 471 aa9.64□□□□□ -0.87
VPS60YDR486C NVJ1P38881 321 aa9.64□□□□□ -0.87
VPS60YDR486C FMC1P40491 155 aa9.64□□□□□ -0.87
VPS60YDR486C BRR6P53062 197 aa9.64□□□□□ -0.87
VPS60YDR486C YGR126WP53274 230 aa9.64□□□□□ -0.87
VPS60YDR486C PBP1P53297 722 aaKnown RBP9.64□□□□□ -0.87
VPS60YDR486C PDR16P53860 351 aaKnown RBP9.64□□□□□ -0.87
VPS60YDR486C SCS7Q03529 384 aa9.64□□□□□ -0.87
VPS60YDR486C RRP9Q06506 573 aaKnown RBP9.64□□□□□ -0.87
VPS60YDR486C MDM36Q06820 579 aa9.64□□□□□ -0.87
VPS60YDR486C MTR10Q99189 972 aa9.64□□□□□ -0.87
VPS60YDR486C RPL24BP24000 155 aaKnown RBP9.63□□□□□ -0.87
VPS60YDR486C CHK1P38147 527 aa9.63□□□□□ -0.87
VPS60YDR486C VBA2P38358 474 aaKnown RBP9.63□□□□□ -0.87
VPS60YDR486C MLH1P38920 769 aa9.63□□□□□ -0.87
VPS60YDR486C PHO90P39535 881 aa9.63□□□□□ -0.87
VPS60YDR486C SHO1P40073 367 aa9.63□□□□□ -0.87
VPS60YDR486C SEC24P40482 926 aaKnown RBP9.63□□□□□ -0.87
VPS60YDR486C PFS2P42841 465 aaKnown RBP9.63□□□□□ -0.87
VPS60YDR486C SFH5P47008 294 aa9.63□□□□□ -0.87
VPS60YDR486C SCW11P53189 542 aa9.63□□□□□ -0.87
VPS60YDR486C MGR3Q04472 501 aa9.63□□□□□ -0.87
VPS60YDR486C YDL176WQ12027 708 aa9.63□□□□□ -0.87
VPS60YDR486C YFR010W-AP0C5N0 62 aa9.62□□□□□ -0.87
VPS60YDR486C SBA1P28707 216 aaKnown RBP9.62□□□□□ -0.87
VPS60YDR486C ECT1P33412 323 aa9.62□□□□□ -0.87
VPS60YDR486C UTP11P34247 250 aaPredicted RBP9.62□□□□□ -0.87
VPS60YDR486C DTR1P38125 572 aa9.62□□□□□ -0.87
VPS60YDR486C APD1P38281 316 aa9.62□□□□□ -0.87
VPS60YDR486C PCL6P40038 420 aa9.62□□□□□ -0.87
VPS60YDR486C YIL165CP40446 119 aa9.62□□□□□ -0.87
VPS60YDR486C PHB1P40961 287 aa9.62□□□□□ -0.87
VPS60YDR486C VOA1P53262 265 aa9.62□□□□□ -0.87
VPS60YDR486C YPL039WQ03080 316 aa9.62□□□□□ -0.87
VPS60YDR486C SRL4Q03085 281 aa9.62□□□□□ -0.87
VPS60YDR486C SDC1Q03323 175 aa9.62□□□□□ -0.87
VPS60YDR486C GRX3Q03835 250 aa9.62□□□□□ -0.87
VPS60YDR486C YPR147CQ06522 304 aaKnown RBP9.62□□□□□ -0.87
VPS60YDR486C YOR238WQ08634 303 aa9.62□□□□□ -0.87
VPS60YDR486C YAL064W-BO13512 126 aa9.61□□□□□ -0.87
VPS60YDR486C REP1P03871 373 aa9.61□□□□□ -0.87
VPS60YDR486C FUN19P28003 413 aaPredicted RBP9.61□□□□□ -0.87
VPS60YDR486C MOH1P38191 138 aa9.61□□□□□ -0.87
VPS60YDR486C NIT2P47016 307 aa9.61□□□□□ -0.87
VPS60YDR486C PPT1P53043 513 aa9.61□□□□□ -0.87
VPS60YDR486C YGR066CP53242 292 aa9.61□□□□□ -0.87
VPS60YDR486C NUP116Q02630 1113 aa9.61□□□□□ -0.87
VPS60YDR486C NOG1Q02892 647 aaKnown RBP9.61□□□□□ -0.87
VPS60YDR486C FDC1Q03034 503 aa9.61□□□□□ -0.87
VPS60YDR486C IPK1Q06667 281 aa9.61□□□□□ -0.87
VPS60YDR486C YOL114CQ12322 202 aa9.61□□□□□ -0.87
VPS60YDR486C FLO9P39712 1322 aa9.6□□□□□ -0.87
VPS60YDR486C YGL041W-AP0C5N3 154 aa9.6□□□□□ -0.87
VPS60YDR486C NFS1P25374 497 aa9.6□□□□□ -0.87
VPS60YDR486C PPA2P28239 310 aa9.6□□□□□ -0.87
VPS60YDR486C ATS1P31386 333 aa9.6□□□□□ -0.87
VPS60YDR486C FMP23P38231 175 aa9.6□□□□□ -0.87
VPS60YDR486C JLP2P40206 208 aa9.6□□□□□ -0.87
VPS60YDR486C RFC4P40339 323 aaKnown RBP9.6□□□□□ -0.87
VPS60YDR486C YIL169CP40442 995 aa9.6□□□□□ -0.87
VPS60YDR486C SDP1P40479 209 aa9.6□□□□□ -0.87
VPS60YDR486C YGR054WP53235 642 aaKnown RBP9.6□□□□□ -0.87
VPS60YDR486C NFT1P0CE68 1218 aa9.59□□□□□ -0.87
VPS60YDR486C PDX1P16451 410 aa9.59□□□□□ -0.87
VPS60YDR486C CPR2P23285 205 aa9.59□□□□□ -0.87
VPS60YDR486C CLB2P24869 491 aa9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms