RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W NCA2Q12374 616 aa1.21□□□□□ -2.22
MSN5YDR335W ADE4P04046 510 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W PMA1P05030 918 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W CHO2P05374 869 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W INO2P26798 304 aa1.21□□□□□ -2.22
MSN5YDR335W RAD24P32641 659 aa1.21□□□□□ -2.22
MSN5YDR335W MAK5P38112 773 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W POP7P38291 140 aa1.21□□□□□ -2.22
MSN5YDR335W FZO1P38297 855 aa1.21□□□□□ -2.22
MSN5YDR335W LYS1P38998 373 aaRIP-Chip data1.21□□□□□ -2.22not detected
MSN5YDR335W SOP4P39543 234 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W AGE2P40529 298 aa1.21□□□□□ -2.22
MSN5YDR335W RPS10BP46784 105 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W YJL016WP47072 561 aa1.21□□□□□ -2.22
MSN5YDR335W COX16P47081 118 aa1.21□□□□□ -2.22
MSN5YDR335W ASN1P49089 572 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W GET1P53192 235 aa1.21□□□□□ -2.22
MSN5YDR335W MTM1P53320 366 aa1.21□□□□□ -2.22
MSN5YDR335W YIP3P53633 176 aa1.21□□□□□ -2.22
MSN5YDR335W MSC1Q03104 513 aa1.21□□□□□ -2.22
MSN5YDR335W CCE1Q03702 353 aa1.21□□□□□ -2.22
MSN5YDR335W ALE1Q08548 619 aa1.21□□□□□ -2.22
MSN5YDR335W JLP1Q12358 412 aa1.21□□□□□ -2.22
MSN5YDR335W IZH4Q99393 312 aa1.21□□□□□ -2.22
MSN5YDR335W CCH1P50077 2039 aa1.21□□□□□ -2.22
MSN5YDR335W STE4P18851 423 aa1.21□□□□□ -2.22
MSN5YDR335W ERG4P25340 473 aa1.21□□□□□ -2.22
MSN5YDR335W CPR3P25719 182 aa1.21□□□□□ -2.22
MSN5YDR335W ACH1P32316 526 aa1.21□□□□□ -2.22
MSN5YDR335W VMA6P32366 345 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W LOS1P33418 1100 aaPredicted RBP1.21□□□□□ -2.22
MSN5YDR335W MIA40P36046 403 aa1.21□□□□□ -2.22
MSN5YDR335W DBP7P36120 742 aaKnown RBP1.21□□□□□ -2.22
MSN5YDR335W CHK1P38147 527 aa1.21□□□□□ -2.22
MSN5YDR335W ICE2P40499 491 aa1.21□□□□□ -2.22
MSN5YDR335W USE1P53146 245 aa1.21□□□□□ -2.22
MSN5YDR335W MTQ1P53944 314 aa1.21□□□□□ -2.22
MSN5YDR335W IZH1Q03419 316 aa1.21□□□□□ -2.22
MSN5YDR335W CAC2Q04199 468 aa1.21□□□□□ -2.22
MSN5YDR335W RTT103Q05543 409 aa1.21□□□□□ -2.22
MSN5YDR335W RUP1Q12242 671 aa1.21□□□□□ -2.22
MSN5YDR335W RNH203Q12338 110 aa1.21□□□□□ -2.22
MSN5YDR335W PET20Q99373 253 aa1.21□□□□□ -2.22
MSN5YDR335W HIS4P00815 799 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W REP1P03871 373 aa1.2□□□□□ -2.22
MSN5YDR335W SCEIP03882 235 aa1.2□□□□□ -2.22
MSN5YDR335W YJU2P28320 278 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W ATP7P30902 174 aa1.2□□□□□ -2.22
MSN5YDR335W SAC1P32368 623 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W MSS1P32559 526 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W YKL063CP35725 167 aa1.2□□□□□ -2.22
MSN5YDR335W FIG1P38224 298 aa1.2□□□□□ -2.22
MSN5YDR335W LAG1P38703 411 aa1.2□□□□□ -2.22
MSN5YDR335W FLO5P38894 1075 aa1.2□□□□□ -2.22
MSN5YDR335W CCT2P39076 527 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W GAT1P43574 510 aa1.2□□□□□ -2.22
MSN5YDR335W VPS25P47142 202 aa1.2□□□□□ -2.22
MSN5YDR335W CAF40P53829 373 aa1.2□□□□□ -2.22
MSN5YDR335W DIA1P54005 336 aa1.2□□□□□ -2.22
MSN5YDR335W IRC4Q03036 179 aa1.2□□□□□ -2.22
MSN5YDR335W TRM82Q03774 444 aa1.2□□□□□ -2.22
MSN5YDR335W RAD34Q06665 692 aa1.2□□□□□ -2.22
MSN5YDR335W THI20Q08224 551 aa1.2□□□□□ -2.22
MSN5YDR335W RKM5Q12367 367 aa1.2□□□□□ -2.22
MSN5YDR335W ATG31Q12421 196 aa1.2□□□□□ -2.22
MSN5YDR335W YKL183C-AQ3E765 70 aa1.2□□□□□ -2.22
MSN5YDR335W NCB2Q92317 146 aa1.2□□□□□ -2.22
MSN5YDR335W FKS1P38631 1876 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W EXG1P23776 448 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W RNA15P25299 296 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W CDC10P25342 322 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W RPL16BP26785 198 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W MCH2P36032 473 aa1.2□□□□□ -2.22
MSN5YDR335W FRE2P36033 711 aa1.2□□□□□ -2.22
MSN5YDR335W AME1P38313 324 aa1.2□□□□□ -2.22
MSN5YDR335W YAT2P40017 923 aa1.2□□□□□ -2.22
MSN5YDR335W YJR011CP47086 261 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W UBP8P50102 471 aa1.2□□□□□ -2.22
MSN5YDR335W YGL117WP53133 265 aa1.2□□□□□ -2.22
MSN5YDR335W NSA1P53136 463 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W YGL082WP53155 381 aa1.2□□□□□ -2.22
MSN5YDR335W PEX12Q04370 399 aa1.2□□□□□ -2.22
MSN5YDR335W YMR317WQ04893 1140 aa1.2□□□□□ -2.22
MSN5YDR335W DIC1Q06143 298 aa1.2□□□□□ -2.22
MSN5YDR335W YOL073CQ08232 322 aa1.2□□□□□ -2.22
MSN5YDR335W UTP23Q12339 254 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W FAB1P34756 2278 aa1.2□□□□□ -2.22
MSN5YDR335W FRS2P15625 503 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W ARF2P19146 181 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W PTP1P25044 335 aa1.2□□□□□ -2.22
MSN5YDR335W GIT1P25346 518 aa1.2□□□□□ -2.22
MSN5YDR335W POF1P25576 258 aa1.2□□□□□ -2.22
MSN5YDR335W SPT4P32914 102 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W MTR2P34232 184 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W AIM29P36154 155 aa1.2□□□□□ -2.22
MSN5YDR335W PRS4P38063 326 aaPredicted RBP1.2□□□□□ -2.22
MSN5YDR335W YPT10P38146 199 aa1.2□□□□□ -2.22
MSN5YDR335W PRS2P38620 318 aaKnown RBP1.2□□□□□ -2.22
MSN5YDR335W VMA22P38784 181 aa1.2□□□□□ -2.22
MSN5YDR335W CHS7P38843 316 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 215.7 ms