RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W WTM1Q12363 437 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W YPL247CQ12523 523 aa0.96□□□□□ -2.26
SCC2YDR180W ISD11Q6Q560 94 aa0.96□□□□□ -2.26
SCC2YDR180W SUC2P00724 532 aa0.95□□□□□ -2.26
SCC2YDR180W AAC1P04710 309 aa0.95□□□□□ -2.26
SCC2YDR180W SIR3P06701 978 aa0.95□□□□□ -2.26
SCC2YDR180W GAL7P08431 366 aa0.95□□□□□ -2.26
SCC2YDR180W YER190C-BP0CX94 160 aa0.95□□□□□ -2.26
SCC2YDR180W YEL077W-AP0CX95 160 aa0.95□□□□□ -2.26
SCC2YDR180W YGR296C-BP0CX96 160 aa0.95□□□□□ -2.26
SCC2YDR180W YPL283W-BP0CX97 160 aa0.95□□□□□ -2.26
SCC2YDR180W YPR204C-AP0CX98 160 aa0.95□□□□□ -2.26
SCC2YDR180W VMA2P16140 517 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W PDA1P16387 420 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W IMG1P25626 169 aa0.95□□□□□ -2.26
SCC2YDR180W NDI1P32340 513 aa0.95□□□□□ -2.26
SCC2YDR180W ASF2P32448 525 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W DCG1P32460 244 aa0.95□□□□□ -2.26
SCC2YDR180W UTR4P32626 227 aa0.95□□□□□ -2.26
SCC2YDR180W MRPL40P36534 297 aa0.95□□□□□ -2.26
SCC2YDR180W MMS4P38257 691 aa0.95□□□□□ -2.26
SCC2YDR180W PHM8P40025 321 aa0.95□□□□□ -2.26
SCC2YDR180W CAK1P43568 368 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W YFR020WP43600 232 aa0.95□□□□□ -2.26
SCC2YDR180W ALK1P43633 760 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W YJR012CP47087 207 aa0.95□□□□□ -2.26
SCC2YDR180W JJJ3P47138 172 aa0.95□□□□□ -2.26
SCC2YDR180W ASN1P49089 572 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W YIP5P53108 310 aa0.95□□□□□ -2.26
SCC2YDR180W MLC1P53141 149 aa0.95□□□□□ -2.26
SCC2YDR180W PNC1P53184 216 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W RMI1Q02685 241 aa0.95□□□□□ -2.26
SCC2YDR180W SWF1Q04629 336 aa0.95□□□□□ -2.26
SCC2YDR180W LUC7Q07508 261 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W MUM3Q08750 479 aa0.95□□□□□ -2.26
SCC2YDR180W MMT2Q08970 484 aa0.95□□□□□ -2.26
SCC2YDR180W MRH1Q12117 320 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W YDR061WQ12298 539 aa0.95□□□□□ -2.26
SCC2YDR180W PFK27Q12471 397 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W YJR112W-AQ3E743 109 aa0.95□□□□□ -2.26
SCC2YDR180W SAS5Q99314 248 aa0.95□□□□□ -2.26
SCC2YDR180W CYR1P08678 2026 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W HAP2P06774 265 aa0.95□□□□□ -2.26
SCC2YDR180W ALG7P07286 448 aa0.95□□□□□ -2.26
SCC2YDR180W YML003WP0CF16 290 aa0.95□□□□□ -2.26
SCC2YDR180W AMD1P15274 810 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W UTR1P21373 530 aa0.95□□□□□ -2.26
SCC2YDR180W PRE7P23724 241 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W FUB1P25659 250 aa0.95□□□□□ -2.26
SCC2YDR180W HYM1P32464 399 aa0.95□□□□□ -2.26
SCC2YDR180W TSA1P34760 196 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W TUL1P36096 758 aa0.95□□□□□ -2.26
SCC2YDR180W DED81P38707 554 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W KEL1P38853 1164 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W IKI1P38874 309 aa0.95□□□□□ -2.26
SCC2YDR180W SOK1P40317 901 aa0.95□□□□□ -2.26
SCC2YDR180W YIL089WP40500 205 aa0.95□□□□□ -2.26
SCC2YDR180W GLR1P41921 483 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W YFL066CP43538 392 aa0.95□□□□□ -2.26
SCC2YDR180W COS5P47187 383 aa0.95□□□□□ -2.26
SCC2YDR180W CCC1P47818 322 aa0.95□□□□□ -2.26
SCC2YDR180W EOS1P53938 366 aa0.95□□□□□ -2.26
SCC2YDR180W ALG11P53954 548 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W RPA49Q01080 415 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W SKI8Q02793 397 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W RLI1Q03195 608 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W TDA1Q03533 586 aa0.95□□□□□ -2.26
SCC2YDR180W DBP9Q06218 594 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W COS7Q07788 383 aa0.95□□□□□ -2.26
SCC2YDR180W RRG7Q08774 242 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W USV1Q12132 391 aa0.95□□□□□ -2.26
SCC2YDR180W PRS5Q12265 496 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W ATG5Q12380 294 aa0.95□□□□□ -2.26
SCC2YDR180W YER175W-AQ8TGU4 54 aa0.95□□□□□ -2.26
SCC2YDR180W SPS2P08459 502 aa0.95□□□□□ -2.26
SCC2YDR180W HSP26P15992 214 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
SCC2YDR180W CCA1P21269 546 aa0.95□□□□□ -2.26
SCC2YDR180W KAR4P25583 335 aa0.95□□□□□ -2.26
SCC2YDR180W IDH2P28241 369 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W CRM1P30822 1084 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W ZIP1P31111 875 aa0.95□□□□□ -2.26
SCC2YDR180W PTK1P36002 662 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W KKQ8P36004 724 aa0.95□□□□□ -2.26
SCC2YDR180W TCM62P38228 572 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W SAF1P38352 637 aa0.95□□□□□ -2.26
SCC2YDR180W ARN1P38731 627 aa0.95□□□□□ -2.26
SCC2YDR180W YHR177WP38867 453 aa0.95□□□□□ -2.26
SCC2YDR180W FAA2P39518 744 aa0.95□□□□□ -2.26
SCC2YDR180W LRO1P40345 661 aa0.95□□□□□ -2.26
SCC2YDR180W NAS2P40555 220 aa0.95□□□□□ -2.26
SCC2YDR180W COS4P43542 379 aa0.95□□□□□ -2.26
SCC2YDR180W HSH155P49955 971 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W MDM34P53083 459 aa0.95□□□□□ -2.26
SCC2YDR180W YGR017WP53210 297 aa0.95□□□□□ -2.26
SCC2YDR180W YGR066CP53242 292 aa0.95□□□□□ -2.26
SCC2YDR180W TIM13P53299 105 aa0.95□□□□□ -2.26
SCC2YDR180W RSM27P53305 110 aa0.95□□□□□ -2.26
SCC2YDR180W MRPL50P53724 139 aa0.95□□□□□ -2.26
SCC2YDR180W YNR062CP53748 327 aa0.95□□□□□ -2.26
SCC2YDR180W COS1P53822 381 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms