RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W ARH1P48360 493 aa5.08□□□□□ -1.6
FOB1YDR110W JAC1P53193 184 aa5.08□□□□□ -1.6
FOB1YDR110W SOK2P53438 785 aaPredicted RBP5.08□□□□□ -1.6
FOB1YDR110W COG5P53951 403 aa5.08□□□□□ -1.6
FOB1YDR110W BER1Q06688 274 aaKnown RBP5.08□□□□□ -1.6
FOB1YDR110W SOR2Q07786 357 aa5.08□□□□□ -1.6
FOB1YDR110W YLR419WQ06698 1435 aaKnown RBP5.07□□□□□ -1.6
FOB1YDR110W OPI3P05375 206 aa5.07□□□□□ -1.6
FOB1YDR110W MXR2P25566 168 aa5.07□□□□□ -1.6
FOB1YDR110W FUN26P31381 517 aa5.07□□□□□ -1.6
FOB1YDR110W SUI1P32911 108 aaKnown RBP5.07□□□□□ -1.6
FOB1YDR110W BNA4P38169 460 aa5.07□□□□□ -1.6
FOB1YDR110W SHG1P38337 142 aa5.07□□□□□ -1.6
FOB1YDR110W NPT1P39683 429 aaKnown RBP5.07□□□□□ -1.6
FOB1YDR110W RMD6P39975 231 aa5.07□□□□□ -1.6
FOB1YDR110W FMP52P40008 231 aa5.07□□□□□ -1.6
FOB1YDR110W COX15P40086 486 aa5.07□□□□□ -1.6
FOB1YDR110W YMR134WP40207 237 aa5.07□□□□□ -1.6
FOB1YDR110W AIM24P47127 394 aa5.07□□□□□ -1.6
FOB1YDR110W IBD2P53892 351 aa5.07□□□□□ -1.6
FOB1YDR110W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
FOB1YDR110W CAC2Q04199 468 aa5.07□□□□□ -1.6
FOB1YDR110W YML096WQ04489 525 aa5.07□□□□□ -1.6
FOB1YDR110W YLR031WQ07978 186 aa5.07□□□□□ -1.6
FOB1YDR110W PUS7Q08647 676 aaKnown RBP5.07□□□□□ -1.6
FOB1YDR110W YOR114WQ12219 294 aa5.07□□□□□ -1.6
FOB1YDR110W HIS1P00498 297 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W COR1P07256 457 aa5.06□□□□□ -1.6
FOB1YDR110W YCR102CP25608 368 aa5.06□□□□□ -1.6
FOB1YDR110W CDC20P26309 610 aa5.06□□□□□ -1.6
FOB1YDR110W LAC1P28496 418 aa5.06□□□□□ -1.6
FOB1YDR110W PCF11P39081 626 aaPredicted RBP5.06□□□□□ -1.6
FOB1YDR110W MBB1P39534 108 aa5.06□□□□□ -1.6
FOB1YDR110W FCY21P40039 528 aa5.06□□□□□ -1.6
FOB1YDR110W GET2P40056 285 aa5.06□□□□□ -1.6
FOB1YDR110W IDP2P41939 412 aa5.06□□□□□ -1.6
FOB1YDR110W CTK3P46963 296 aaPredicted RBP5.06□□□□□ -1.6
FOB1YDR110W ALG13P53178 202 aa5.06□□□□□ -1.6
FOB1YDR110W FHN1P53279 174 aa5.06□□□□□ -1.6
FOB1YDR110W VPS62P53285 467 aa5.06□□□□□ -1.6
FOB1YDR110W GTR2P53290 341 aa5.06□□□□□ -1.6
FOB1YDR110W NRK1P53915 240 aa5.06□□□□□ -1.6
FOB1YDR110W YPL068CQ02749 293 aa5.06□□□□□ -1.6
FOB1YDR110W SNX41Q04053 625 aa5.06□□□□□ -1.6
FOB1YDR110W DPP1Q05521 289 aa5.06□□□□□ -1.6
FOB1YDR110W SNT309Q06091 175 aaPredicted RBP5.06□□□□□ -1.6
FOB1YDR110W LDB18Q07887 179 aa5.06□□□□□ -1.6
FOB1YDR110W HNT3Q08702 217 aa5.06□□□□□ -1.6
FOB1YDR110W JLP1Q12358 412 aa5.06□□□□□ -1.6
FOB1YDR110W RTR2Q12378 196 aa5.06□□□□□ -1.6
FOB1YDR110W YCL001W-BQ96VH2 84 aa5.06□□□□□ -1.6
FOB1YDR110W Q0010Q9ZZX9 128 aa5.06□□□□□ -1.6
FOB1YDR110W SDH2P21801 266 aa5.06□□□□□ -1.6
FOB1YDR110W RSA4P25382 515 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W MRPL6P32904 214 aa5.06□□□□□ -1.6
FOB1YDR110W MYO3P36006 1272 aa5.06□□□□□ -1.6
FOB1YDR110W ARP1P38696 384 aa5.06□□□□□ -1.6
FOB1YDR110W MET30P39014 640 aa5.06□□□□□ -1.6
FOB1YDR110W UIP3P39547 235 aa5.06□□□□□ -1.6
FOB1YDR110W YPS6P40583 537 aa5.06□□□□□ -1.6
FOB1YDR110W PRP24P49960 444 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W AZR1P50080 613 aa5.06□□□□□ -1.6
FOB1YDR110W SOL4P53315 255 aa5.06□□□□□ -1.6
FOB1YDR110W GIP3Q03016 1276 aa5.06□□□□□ -1.6
FOB1YDR110W YMR279CQ03263 540 aa5.06□□□□□ -1.6
FOB1YDR110W PLP1Q04004 230 aa5.06□□□□□ -1.6
FOB1YDR110W SWF1Q04629 336 aa5.06□□□□□ -1.6
FOB1YDR110W PRM6Q04705 352 aa5.06□□□□□ -1.6
FOB1YDR110W RGC1Q06108 1083 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W PBP4Q07362 185 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W TEN1Q07921 160 aa5.06□□□□□ -1.6
FOB1YDR110W SGT1Q08446 395 aa5.06□□□□□ -1.6
FOB1YDR110W YNG1Q08465 219 aa5.06□□□□□ -1.6
FOB1YDR110W YPQ1Q12010 308 aa5.06□□□□□ -1.6
FOB1YDR110W RGS2Q99188 309 aa5.06□□□□□ -1.6
FOB1YDR110W HRP1Q99383 534 aaKnown RBP5.06□□□□□ -1.6
FOB1YDR110W RHO2P06781 192 aa5.05□□□□□ -1.6
FOB1YDR110W TUB1P09733 447 aaKnown RBP5.05□□□□□ -1.6
FOB1YDR110W KAR9P32526 644 aa5.05□□□□□ -1.6
FOB1YDR110W MSY1P48527 492 aa5.05□□□□□ -1.6
FOB1YDR110W AAT1Q01802 451 aa5.05□□□□□ -1.6
FOB1YDR110W ABF2Q02486 183 aa5.05□□□□□ -1.6
FOB1YDR110W TMN2Q04562 672 aa5.05□□□□□ -1.6
FOB1YDR110W YPR091CQ06833 770 aa5.05□□□□□ -1.6
FOB1YDR110W TPO4Q12256 659 aa5.05□□□□□ -1.6
FOB1YDR110W ERP3Q12403 225 aa5.05□□□□□ -1.6
FOB1YDR110W COX1P00401 534 aa5.04□□□□□ -1.6
FOB1YDR110W GAL10P04397 699 aa5.04□□□□□ -1.6
FOB1YDR110W RPL12AP0CX53 165 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W RPL12BP0CX54 165 aa5.04□□□□□ -1.6
FOB1YDR110W MCK1P21965 375 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W SLY1P22213 666 aa5.04□□□□□ -1.6
FOB1YDR110W RNA15P25299 296 aaPredicted RBP5.04□□□□□ -1.6
FOB1YDR110W YBL010CP32788 280 aa5.04□□□□□ -1.6
FOB1YDR110W PPZ2P33329 710 aa5.04□□□□□ -1.6
FOB1YDR110W NNK1P36003 928 aa5.04□□□□□ -1.6
FOB1YDR110W PRS3P38689 320 aaKnown RBP5.04□□□□□ -1.6
FOB1YDR110W YFR020WP43600 232 aa5.04□□□□□ -1.6
FOB1YDR110W PTR3P43606 678 aa5.04□□□□□ -1.6
FOB1YDR110W TIS11P47977 285 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms