RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C CSI1Q04368 295 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C RDL2Q08742 149 aaKnown RBP2.68□□□□□ -1.98
YDR034C-CYDR034C-C YPR063CQ12160 140 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C TFC7Q12415 435 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C SAL1D6W196 494 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C HPR1P17629 752 aaKnown RBP2.68□□□□□ -1.98
YDR034C-CYDR034C-C MRPL20P22354 195 aaPredicted RBP2.68□□□□□ -1.98
YDR034C-CYDR034C-C INO2P26798 304 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C ACB1P31787 87 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C VPH1P32563 840 aaKnown RBP2.68□□□□□ -1.98
YDR034C-CYDR034C-C SWI3P32591 825 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C YPL245WQ12179 454 aaKnown RBP2.68□□□□□ -1.98
YDR034C-CYDR034C-C YDR262WQ12331 272 aa2.68□□□□□ -1.98
YDR034C-CYDR034C-C DAL5P15365 543 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C ERD1P16151 362 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C SMI1P32566 505 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C YEL043WP32618 956 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C ECM14P38836 430 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C YGR168CP53293 376 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C HRT1Q08273 121 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C TRM10Q12400 293 aa2.67□□□□□ -1.98
YDR034C-CYDR034C-C RNR2P09938 399 aaKnown RBP2.66□□□□□ -1.98
YDR034C-CYDR034C-C CSE1P33307 960 aa2.66□□□□□ -1.98
YDR034C-CYDR034C-C ASP1P38986 381 aaPredicted RBP2.66□□□□□ -1.98
YDR034C-CYDR034C-C BUD13P46947 266 aaPredicted RBP2.66□□□□□ -1.98
YDR034C-CYDR034C-C MIM1Q08176 113 aa2.66□□□□□ -1.98
YDR034C-CYDR034C-C CBP2P03874 630 aaPredicted RBP2.65□□□□□ -1.99
YDR034C-CYDR034C-C BUD2P33314 1104 aa2.65□□□□□ -1.99
YDR034C-CYDR034C-C PSY3Q12318 242 aa2.65□□□□□ -1.99
YDR034C-CYDR034C-C TKL2P33315 681 aa2.64□□□□□ -1.99
YDR034C-CYDR034C-C IRC4Q03036 179 aa2.64□□□□□ -1.99
YDR034C-CYDR034C-C YDR114CQ04597 100 aa2.64□□□□□ -1.99
YDR034C-CYDR034C-C YLR012CQ07927 99 aa2.64□□□□□ -1.99
YDR034C-CYDR034C-C VIK1Q12045 647 aa2.64□□□□□ -1.99
YDR034C-CYDR034C-C PPQ1P32945 549 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C EDC2P40023 145 aaPredicted RBP2.63□□□□□ -1.99
YDR034C-CYDR034C-C ECO1P43605 281 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C FYV8P46949 817 aaKnown RBP2.63□□□□□ -1.99
YDR034C-CYDR034C-C YNR066CP53752 436 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C YDR222WQ04925 415 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C YPL264CQ08980 353 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C IES3Q12345 250 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C ERP3Q12403 225 aa2.63□□□□□ -1.99
YDR034C-CYDR034C-C ALK2P32789 676 aaPredicted RBP2.62□□□□□ -1.99
YDR034C-CYDR034C-C SUR1P33300 382 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C MED8P38304 223 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C PET8P38921 284 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C PES4P39684 611 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C SHE4P51534 789 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C GTO3Q04806 366 aa2.62□□□□□ -1.99
YDR034C-CYDR034C-C SGT2Q12118 346 aaKnown RBP2.62□□□□□ -1.99
YDR034C-CYDR034C-C ARO4P32449 370 aaKnown RBP2.61□□□□□ -1.99
YDR034C-CYDR034C-C UTR5P32630 166 aa2.61□□□□□ -1.99
YDR034C-CYDR034C-C UIP5P36137 443 aa2.61□□□□□ -1.99
YDR034C-CYDR034C-C LIN1P38852 340 aaPredicted RBP2.61□□□□□ -1.99
YDR034C-CYDR034C-C YGL088WP53151 121 aa2.61□□□□□ -1.99
YDR034C-CYDR034C-C UBX2Q04228 584 aa2.61□□□□□ -1.99
YDR034C-CYDR034C-C RLP24Q07915 199 aaKnown RBP2.61□□□□□ -1.99
YDR034C-CYDR034C-C RPL18AP0CX49 186 aaKnown RBP2.6□□□□□ -1.99
YDR034C-CYDR034C-C RPL18BP0CX50 186 aaKnown RBP2.6□□□□□ -1.99
YDR034C-CYDR034C-C GAL3P13045 520 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C ZRT1P32804 376 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C HSH155P49955 971 aaKnown RBP2.6□□□□□ -1.99
YDR034C-CYDR034C-C YNL040WP53960 456 aaPredicted RBP2.6□□□□□ -1.99
YDR034C-CYDR034C-C YPL080CQ02826 108 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C YPL113CQ02961 396 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C SNX41Q04053 625 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C ARC18Q05933 178 aaKnown RBP2.6□□□□□ -1.99
YDR034C-CYDR034C-C DXO1Q06349 442 aa2.6□□□□□ -1.99
YDR034C-CYDR034C-C DAL81P21657 970 aa2.59□□□□□ -2
YDR034C-CYDR034C-C MRPL6P32904 214 aa2.59□□□□□ -2
YDR034C-CYDR034C-C YHR035WP38769 630 aa2.59□□□□□ -2
YDR034C-CYDR034C-C SMC2P38989 1170 aaKnown RBP2.59□□□□□ -2
YDR034C-CYDR034C-C SOP4P39543 234 aaPredicted RBP2.59□□□□□ -2
YDR034C-CYDR034C-C UTP25P40498 721 aaKnown RBP2.59□□□□□ -2
YDR034C-CYDR034C-C SEC13Q04491 297 aaKnown RBP2.59□□□□□ -2
YDR034C-CYDR034C-C YOR292CQ08743 309 aa2.59□□□□□ -2
YDR034C-CYDR034C-C UTP23Q12339 254 aaKnown RBP2.59□□□□□ -2
YDR034C-CYDR034C-C LAG2Q92325 660 aa2.59□□□□□ -2
YDR034C-CYDR034C-C MIG1P27705 504 aa2.58□□□□□ -2
YDR034C-CYDR034C-C AIM29P36154 155 aa2.58□□□□□ -2
YDR034C-CYDR034C-C SDH4P37298 181 aa2.58□□□□□ -2
YDR034C-CYDR034C-C YFR045WP43617 309 aa2.58□□□□□ -2
YDR034C-CYDR034C-C MRX4Q12467 430 aa2.58□□□□□ -2
YDR034C-CYDR034C-C TDH3P00359 332 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
YDR034C-CYDR034C-C MET2P08465 486 aa2.57□□□□□ -2
YDR034C-CYDR034C-C VPS1P21576 704 aaKnown RBP2.57□□□□□ -2
YDR034C-CYDR034C-C YPS1P32329 569 aa2.57□□□□□ -2
YDR034C-CYDR034C-C NAS2P40555 220 aa2.57□□□□□ -2
YDR034C-CYDR034C-C ACT1P60010 375 aaKnown RBP2.57□□□□□ -2
YDR034C-CYDR034C-C SAM4Q08985 325 aaKnown RBP2.57□□□□□ -2
YDR034C-CYDR034C-C IFM1P25038 676 aa2.56□□□□□ -2
YDR034C-CYDR034C-C VPH2P32341 215 aa2.56□□□□□ -2
YDR034C-CYDR034C-C YKR032WP36127 104 aa2.56□□□□□ -2
YDR034C-CYDR034C-C INA22P40576 216 aa2.56□□□□□ -2
YDR034C-CYDR034C-C YFL040WP43562 540 aa2.56□□□□□ -2
YDR034C-CYDR034C-C YGR266WP53326 701 aa2.56□□□□□ -2
YDR034C-CYDR034C-C YPR1Q12458 312 aa2.56□□□□□ -2
YDR034C-CYDR034C-C YAK1P14680 807 aa2.55□□□□□ -2
YDR034C-CYDR034C-C SCC4P40090 624 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms