RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W SPC2Q04969 178 aa5.32□□□□□ -1.56
TRP1YDR007W YPR078CQ06813 372 aa5.32□□□□□ -1.56
TRP1YDR007W LOT6Q07923 191 aa5.32□□□□□ -1.56
TRP1YDR007W YPL199CQ08954 240 aa5.32□□□□□ -1.56
TRP1YDR007W HRT3Q12347 344 aa5.32□□□□□ -1.56
TRP1YDR007W DSF1P0CX08 502 aa5.31□□□□□ -1.56
TRP1YDR007W YNR073CP0CX09 502 aa5.31□□□□□ -1.56
TRP1YDR007W RPL12AP0CX53 165 aaKnown RBP5.31□□□□□ -1.56
TRP1YDR007W RPL12BP0CX54 165 aa5.31□□□□□ -1.56
TRP1YDR007W YCR043CP25361 127 aa5.31□□□□□ -1.56
TRP1YDR007W PRR1P28708 518 aa5.31□□□□□ -1.56
TRP1YDR007W CAM1P29547 415 aaKnown RBP5.31□□□□□ -1.56
TRP1YDR007W ASF2P32448 525 aaPredicted RBP5.31□□□□□ -1.56
TRP1YDR007W DOA4P32571 926 aa5.31□□□□□ -1.56
TRP1YDR007W SBE22P38814 852 aa5.31□□□□□ -1.56
TRP1YDR007W BZZ1P38822 633 aa5.31□□□□□ -1.56
TRP1YDR007W YHR177WP38867 453 aa5.31□□□□□ -1.56
TRP1YDR007W FAA2P39518 744 aa5.31□□□□□ -1.56
TRP1YDR007W AGE2P40529 298 aa5.31□□□□□ -1.56
TRP1YDR007W GTT1P40582 234 aa5.31□□□□□ -1.56
TRP1YDR007W TES1P41903 349 aaKnown RBP5.31□□□□□ -1.56
TRP1YDR007W DIE2P50076 525 aa5.31□□□□□ -1.56
TRP1YDR007W YGR067CP53243 804 aa5.31□□□□□ -1.56
TRP1YDR007W PIR3Q03180 325 aa5.31□□□□□ -1.56
TRP1YDR007W YMR010WQ03687 405 aa5.31□□□□□ -1.56
TRP1YDR007W LAG2Q92325 660 aa5.31□□□□□ -1.56
TRP1YDR007W CBP2P03874 630 aaPredicted RBP5.3□□□□□ -1.56
TRP1YDR007W SAM1P10659 382 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W OM45P16547 393 aa5.3□□□□□ -1.56
TRP1YDR007W SAM2P19358 384 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W NUP2P32499 720 aa5.3□□□□□ -1.56
TRP1YDR007W GDH2P33327 1092 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W SPT10P35208 640 aa5.3□□□□□ -1.56
TRP1YDR007W YPT52P36018 234 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W EDC3P39998 551 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W SOK1P40317 901 aa5.3□□□□□ -1.56
TRP1YDR007W HPM1P40481 377 aa5.3□□□□□ -1.56
TRP1YDR007W YRB2P40517 327 aa5.3□□□□□ -1.56
TRP1YDR007W YGR210CP42942 411 aa5.3□□□□□ -1.56
TRP1YDR007W YFR018CP43599 363 aa5.3□□□□□ -1.56
TRP1YDR007W RTT101P47050 842 aa5.3□□□□□ -1.56
TRP1YDR007W COX16P47081 118 aa5.3□□□□□ -1.56
TRP1YDR007W AIM24P47127 394 aa5.3□□□□□ -1.56
TRP1YDR007W YJR141WP47172 347 aaPredicted RBP5.3□□□□□ -1.56
TRP1YDR007W PRP24P49960 444 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W YDR249CQ03787 373 aa5.3□□□□□ -1.56
TRP1YDR007W BUR2Q05949 395 aa5.3□□□□□ -1.56
TRP1YDR007W YPR202WQ08993 238 aa5.3□□□□□ -1.56
TRP1YDR007W SRL2Q12020 392 aa5.3□□□□□ -1.56
TRP1YDR007W TY3A-GQ12173 290 aa5.3□□□□□ -1.56
TRP1YDR007W LDB17Q12342 491 aa5.3□□□□□ -1.56
TRP1YDR007W YOR012WQ12351 137 aa5.3□□□□□ -1.56
TRP1YDR007W GTT2Q12390 233 aa5.3□□□□□ -1.56
TRP1YDR007W HMS1Q12398 434 aa5.3□□□□□ -1.56
TRP1YDR007W SET6Q12529 373 aa5.3□□□□□ -1.56
TRP1YDR007W RRP12Q12754 1228 aaKnown RBP5.3□□□□□ -1.56
TRP1YDR007W YBR298C-AQ8TGK4 73 aa5.3□□□□□ -1.56
TRP1YDR007W TY3A-IQ99219 290 aa5.3□□□□□ -1.56
TRP1YDR007W RPL25P04456 142 aaKnown RBP5.29□□□□□ -1.56
TRP1YDR007W RPC40P07703 335 aaKnown RBP5.29□□□□□ -1.56
TRP1YDR007W ARF1P11076 181 aaKnown RBP5.29□□□□□ -1.56
TRP1YDR007W COX13P32799 129 aa5.29□□□□□ -1.56
TRP1YDR007W DOA1P36037 715 aa5.29□□□□□ -1.56
TRP1YDR007W CAF4P36130 643 aa5.29□□□□□ -1.56
TRP1YDR007W MTC4P38335 694 aaKnown RBP5.29□□□□□ -1.56
TRP1YDR007W YBR285WP38354 144 aa5.29□□□□□ -1.56
TRP1YDR007W DHH1P39517 506 aaKnown RBP5.29□□□□□ -1.56
TRP1YDR007W MST28P39552 234 aa5.29□□□□□ -1.56
TRP1YDR007W YND1P40009 630 aa5.29□□□□□ -1.56
TRP1YDR007W ATM1P40416 690 aa5.29□□□□□ -1.56
TRP1YDR007W SAD1P43589 448 aa5.29□□□□□ -1.56
TRP1YDR007W RRT5P43607 289 aa5.29□□□□□ -1.56
TRP1YDR007W PMT5P52867 743 aa5.29□□□□□ -1.56
TRP1YDR007W YMR279CQ03263 540 aa5.29□□□□□ -1.56
TRP1YDR007W YMR310CQ04867 317 aaPredicted RBP5.29□□□□□ -1.56
TRP1YDR007W YNG1Q08465 219 aa5.29□□□□□ -1.56
TRP1YDR007W SRL1Q08673 210 aa5.29□□□□□ -1.56
TRP1YDR007W DCN1Q12395 269 aa5.29□□□□□ -1.56
TRP1YDR007W MAS1P10507 462 aa5.28□□□□□ -1.56
TRP1YDR007W MRS3P10566 314 aa5.28□□□□□ -1.56
TRP1YDR007W GAL3P13045 520 aa5.28□□□□□ -1.56
TRP1YDR007W FBA1P14540 359 aaKnown RBP5.28□□□□□ -1.56
TRP1YDR007W SAR1P20606 190 aaKnown RBP5.28□□□□□ -1.56
TRP1YDR007W RRT12P25381 491 aa5.28□□□□□ -1.56
TRP1YDR007W DAL80P26343 269 aa5.28□□□□□ -1.56
TRP1YDR007W SPT14P32363 452 aa5.28□□□□□ -1.56
TRP1YDR007W IMP3P32899 183 aaPredicted RBP5.28□□□□□ -1.56
TRP1YDR007W YBP1P38315 674 aa5.28□□□□□ -1.56
TRP1YDR007W LCP5P40079 357 aaPredicted RBP5.28□□□□□ -1.56
TRP1YDR007W CIN5P40917 295 aa5.28□□□□□ -1.56
TRP1YDR007W BNA6P43619 295 aa5.28□□□□□ -1.56
TRP1YDR007W STE24P47154 453 aa5.28□□□□□ -1.56
TRP1YDR007W OKP1P53298 406 aa5.28□□□□□ -1.56
TRP1YDR007W GIM3P53900 129 aa5.28□□□□□ -1.56
TRP1YDR007W SKI8Q02793 397 aaPredicted RBP5.28□□□□□ -1.56
TRP1YDR007W NDE2Q07500 545 aa5.28□□□□□ -1.56
TRP1YDR007W YCL001W-BQ96VH2 84 aa5.28□□□□□ -1.56
TRP1YDR007W YLR462WO13556 202 aa5.27□□□□□ -1.57
TRP1YDR007W ATP1P07251 545 aaKnown RBP5.27□□□□□ -1.57
TRP1YDR007W CBP6P07253 162 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms