RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	SFH5	P47008	294 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	MDE1	P47095	244 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	YJR098C	P47139	656 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	PMT5	P52867	743 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	DOC1	P53068	250 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	SAY1	P53324	424 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	MPA43	P53583	542 aa	Predicted RBP	11.24	□□□□□ -0.61
PTP1	YDL230W	SPC19	Q03954	165 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	YML053C	Q04978	212 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	NMA1	Q06178	401 aa	Known RBP	11.24	□□□□□ -0.61
PTP1	YDL230W	YOR378W	Q08902	515 aa		11.24	□□□□□ -0.61
PTP1	YDL230W	GCN4	P03069	281 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	PUT3	P25502	979 aa	Predicted RBP	11.23	□□□□□ -0.61
PTP1	YDL230W	PRE4	P30657	266 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	DOA4	P32571	926 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	CCZ1	P38273	704 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	MSS4	P38994	779 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	HIS6	P40545	261 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	ALK1	P43633	760 aa	Known RBP	11.23	□□□□□ -0.61
PTP1	YDL230W	APS3	P47064	194 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	NCE101	Q02820	53 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	PLP1	Q04004	230 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	HRT1	Q08273	121 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	MDM32	Q12171	622 aa		11.23	□□□□□ -0.61
PTP1	YDL230W	SOD2	P00447	233 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	CAN1	P04817	590 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	DAT1	P13483	248 aa	Known RBP	11.22	□□□□□ -0.61
PTP1	YDL230W	STE12	P13574	688 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	STF2	P16965	84 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	11.22	□□□□□ -0.61	not detected
PTP1	YDL230W	YBR238C	P38330	731 aa	Known RBP	11.22	□□□□□ -0.61
PTP1	YDL230W	MLH1	P38920	769 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	PHO90	P39535	881 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	RTT105	P40063	208 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	PMT6	P42934	759 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	YJR120W	P47157	116 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	TRM9	P49957	279 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	NUP116	Q02630	1113 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	MFB1	Q04922	465 aa		11.22	□□□□□ -0.61
PTP1	YDL230W	RRP9	Q06506	573 aa	Known RBP	11.22	□□□□□ -0.61
PTP1	YDL230W	PEP4	P07267	405 aa	Known RBP	11.21	□□□□□ -0.61
PTP1	YDL230W	STP22	P25604	385 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	FUN19	P28003	413 aa	Predicted RBP	11.21	□□□□□ -0.61
PTP1	YDL230W	VPS17	P32913	551 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	MTH1	P35198	433 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	HTD2	P38790	280 aa	Known RBP	11.21	□□□□□ -0.61
PTP1	YDL230W	CHS7	P38843	316 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	AAD14	P42884	376 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	MNN5	P46982	586 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	BNA5	Q05979	453 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	YOL073C	Q08232	322 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	RDR1	Q08904	546 aa		11.21	□□□□□ -0.61
PTP1	YDL230W	POL2	P21951	2222 aa	Known RBP	11.2	□□□□□ -0.62
PTP1	YDL230W	YMR084W	A2P2R3	262 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	RAD52	P06778	471 aa	Known RBP	11.2	□□□□□ -0.62
PTP1	YDL230W	SPS2	P08459	502 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	HMG1	P12683	1054 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	DIT1	P21623	536 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	ERG4	P25340	473 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	YCR006C	P25350	157 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	11.2	□□□□□ -0.62	not detected
PTP1	YDL230W	YIL086C	P40503	102 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	NAS2	P40555	220 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	DPB11	P47027	764 aa	Predicted RBP	11.2	□□□□□ -0.62
PTP1	YDL230W	YJR141W	P47172	347 aa	Predicted RBP	11.2	□□□□□ -0.62
PTP1	YDL230W	YGR067C	P53243	804 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	HDA2	Q06629	674 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	MTR10	Q99189	972 aa		11.2	□□□□□ -0.62
PTP1	YDL230W	ADK1	P07170	222 aa	Known RBP	11.19	□□□□□ -0.62
PTP1	YDL230W	YSF3	P0C074	85 aa	Predicted RBP	11.19	□□□□□ -0.62
PTP1	YDL230W	MRP1	P10662	321 aa	Known RBP	11.19	□□□□□ -0.62
PTP1	YDL230W	PBN1	P25580	416 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	THI4	P32318	326 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	PAU2	P32612	120 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	NIC96	P34077	839 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	YKL071W	P36086	256 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	GLY1	P37303	387 aa	Known RBP	11.19	□□□□□ -0.62
PTP1	YDL230W	CHK1	P38147	527 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	PEX32	P38292	413 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	NSG1	P38837	291 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	FET3	P38993	636 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	YFR054C	P43622	192 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	RPE1	P46969	238 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	AIM6	Q07716	390 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	AVO1	Q08236	1176 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	BTS1	Q12051	335 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	YDL109C	Q12103	647 aa		11.19	□□□□□ -0.62
PTP1	YDL230W	HTZ1	Q12692	134 aa	Known RBP	11.19	□□□□□ -0.62
PTP1	YDL230W	GAS1	P22146	559 aa	Known RBP	11.18	□□□□□ -0.62
PTP1	YDL230W	DCG1	P32460	244 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	IFA38	P38286	347 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	HXT9	P40885	567 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	SEH1	P53011	349 aa	Known RBP	11.18	□□□□□ -0.62
PTP1	YDL230W	YGR012W	P53206	393 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	OGG1	P53397	376 aa	Predicted RBP	11.18	□□□□□ -0.62
PTP1	YDL230W	HXT11	P54862	567 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	DIC1	Q06143	298 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	ASR1	Q06834	288 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	BSC6	Q08280	497 aa		11.18	□□□□□ -0.62
PTP1	YDL230W	FMP40	Q08968	688 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms