RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C MMT2Q08970 484 aa1.94□□□□□ -2.1
BRE1YDL074C YOR283WQ12040 230 aaKnown RBP1.94□□□□□ -2.1
BRE1YDL074C BTS1Q12051 335 aa1.94□□□□□ -2.1
BRE1YDL074C YPR022CQ12139 1133 aa1.94□□□□□ -2.1
BRE1YDL074C YDL177CQ12257 170 aa1.94□□□□□ -2.1
BRE1YDL074C MMP1Q12372 583 aa1.94□□□□□ -2.1
BRE1YDL074C RTR2Q12378 196 aa1.94□□□□□ -2.1
BRE1YDL074C YGR161W-CQ3E744 92 aa1.94□□□□□ -2.1
BRE1YDL074C FSH3Q99369 266 aa1.94□□□□□ -2.1
BRE1YDL074C CYC1P00044 109 aaPredicted RBP1.94□□□□□ -2.1
BRE1YDL074C URA3P03962 267 aa1.94□□□□□ -2.1
BRE1YDL074C MET2P08465 486 aa1.94□□□□□ -2.1
BRE1YDL074C PET54P10834 293 aa1.94□□□□□ -2.1
BRE1YDL074C NAR1P23503 491 aaKnown RBP1.94□□□□□ -2.1
BRE1YDL074C STE50P25344 346 aa1.94□□□□□ -2.1
BRE1YDL074C HCM1P25364 564 aa1.94□□□□□ -2.1
BRE1YDL074C FUN19P28003 413 aaPredicted RBP1.94□□□□□ -2.1
BRE1YDL074C THI4P32318 326 aa1.94□□□□□ -2.1
BRE1YDL074C LYP1P32487 611 aa1.94□□□□□ -2.1
BRE1YDL074C RML2P32611 393 aa1.94□□□□□ -2.1
BRE1YDL074C PAU2P32612 120 aa1.94□□□□□ -2.1
BRE1YDL074C TRS65P32893 560 aa1.94□□□□□ -2.1
BRE1YDL074C ZRT3P34240 503 aa1.94□□□□□ -2.1
BRE1YDL074C PAU24P38155 120 aa1.94□□□□□ -2.1
BRE1YDL074C ALG3P38179 458 aa1.94□□□□□ -2.1
BRE1YDL074C VMA22P38784 181 aa1.94□□□□□ -2.1
BRE1YDL074C PFS1P38872 237 aa1.94□□□□□ -2.1
BRE1YDL074C HRB1P38922 454 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
BRE1YDL074C FET3P38993 636 aa1.94□□□□□ -2.1
BRE1YDL074C FAA3P39002 694 aa1.94□□□□□ -2.1
BRE1YDL074C MIT1P40002 666 aa1.94□□□□□ -2.1
BRE1YDL074C GIP2P40036 548 aa1.94□□□□□ -2.1
BRE1YDL074C HXT9P40885 567 aa1.94□□□□□ -2.1
BRE1YDL074C CIN1P40987 1014 aa1.94□□□□□ -2.1
BRE1YDL074C DPB11P47027 764 aaPredicted RBP1.94□□□□□ -2.1
BRE1YDL074C CCC1P47818 322 aa1.94□□□□□ -2.1
BRE1YDL074C ECL1P48235 211 aa1.94□□□□□ -2.1
BRE1YDL074C ORM1P53224 222 aa1.94□□□□□ -2.1
BRE1YDL074C ART5P53244 586 aaKnown RBP1.94□□□□□ -2.1
BRE1YDL074C VOA1P53262 265 aa1.94□□□□□ -2.1
BRE1YDL074C SLI1P53304 468 aa1.94□□□□□ -2.1
BRE1YDL074C YNR014WP53719 212 aa1.94□□□□□ -2.1
BRE1YDL074C PGA1P53896 198 aa1.94□□□□□ -2.1
BRE1YDL074C YLR460CP54007 376 aa1.94□□□□□ -2.1
BRE1YDL074C MRPL13Q02204 264 aa1.94□□□□□ -2.1
BRE1YDL074C REC102Q02721 264 aa1.94□□□□□ -2.1
BRE1YDL074C PLP1Q04004 230 aa1.94□□□□□ -2.1
BRE1YDL074C YLR283WQ05867 314 aa1.94□□□□□ -2.1
BRE1YDL074C DCR2Q05924 578 aa1.94□□□□□ -2.1
BRE1YDL074C ORM2Q06144 216 aa1.94□□□□□ -2.1
BRE1YDL074C ARV1Q06541 321 aa1.94□□□□□ -2.1
BRE1YDL074C SSK1Q07084 712 aa1.94□□□□□ -2.1
BRE1YDL074C AIM6Q07716 390 aa1.94□□□□□ -2.1
BRE1YDL074C COQ10Q08058 207 aa1.94□□□□□ -2.1
BRE1YDL074C FEX1Q08913 375 aa1.94□□□□□ -2.1
BRE1YDL074C FMP40Q08968 688 aaPredicted RBP1.94□□□□□ -2.1
BRE1YDL074C YDL109CQ12103 647 aa1.94□□□□□ -2.1
BRE1YDL074C SPC3Q12133 184 aa1.94□□□□□ -2.1
BRE1YDL074C SKM1Q12469 655 aa1.94□□□□□ -2.1
BRE1YDL074C YLR099W-AQ3E798 87 aa1.94□□□□□ -2.1
BRE1YDL074C FLP1P03870 423 aa1.93□□□□□ -2.1
BRE1YDL074C MSW1P04803 379 aa1.93□□□□□ -2.1
BRE1YDL074C CDC26P14724 124 aa1.93□□□□□ -2.1
BRE1YDL074C ERD2P18414 219 aa1.93□□□□□ -2.1
BRE1YDL074C AGP1P25376 633 aa1.93□□□□□ -2.1
BRE1YDL074C ERG9P29704 444 aa1.93□□□□□ -2.1
BRE1YDL074C NAB2P32505 525 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1 RIP-Chip
BRE1YDL074C MSS1P32559 526 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C CLG1P35190 452 aa1.93□□□□□ -2.1
BRE1YDL074C ANR2P36090 516 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C UTP30P36144 274 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C YKR073CP36153 106 aa1.93□□□□□ -2.1
BRE1YDL074C NAT2P37293 288 aa1.93□□□□□ -2.1
BRE1YDL074C ECM34P38728 170 aa1.93□□□□□ -2.1
BRE1YDL074C YJL193WP39542 402 aa1.93□□□□□ -2.1
BRE1YDL074C HPA3P39979 161 aa1.93□□□□□ -2.1
BRE1YDL074C GID8P40208 455 aa1.93□□□□□ -2.1
BRE1YDL074C PMT6P42934 759 aa1.93□□□□□ -2.1
BRE1YDL074C AIM25P47140 327 aa1.93□□□□□ -2.1
BRE1YDL074C ECM27P47144 725 aa1.93□□□□□ -2.1
BRE1YDL074C YJR141WP47172 347 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C HXT16P47185 567 aa1.93□□□□□ -2.1
BRE1YDL074C ASK10P48361 1146 aa1.93□□□□□ -2.1
BRE1YDL074C MNN10P50108 393 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C YGL204CP53089 101 aa1.93□□□□□ -2.1
BRE1YDL074C LCL3P53153 274 aa1.93□□□□□ -2.1
BRE1YDL074C CDH1P53197 566 aa1.93□□□□□ -2.1
BRE1YDL074C ERV29P53337 310 aa1.93□□□□□ -2.1
BRE1YDL074C CSL4P53859 292 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C APM1Q00776 475 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C TPP1Q03796 238 aa1.93□□□□□ -2.1
BRE1YDL074C TPO3Q06451 622 aa1.93□□□□□ -2.1
BRE1YDL074C CRT10Q08226 957 aa1.93□□□□□ -2.1
BRE1YDL074C ENB1Q08299 606 aa1.93□□□□□ -2.1
BRE1YDL074C YNG1Q08465 219 aa1.93□□□□□ -2.1
BRE1YDL074C TRM13Q12383 476 aa1.93□□□□□ -2.1
BRE1YDL074C PSF1Q12488 208 aa1.93□□□□□ -2.1
BRE1YDL074C PAR32Q12515 295 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C SET6Q12529 373 aa1.93□□□□□ -2.1
BRE1YDL074C HTZ1Q12692 134 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms