RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W FRE7Q12333 620 aa3.43□□□□□ -1.86
TSR1YDL060W ATG31Q12421 196 aa3.43□□□□□ -1.86
TSR1YDL060W RRP12Q12754 1228 aaKnown RBP3.43□□□□□ -1.86
TSR1YDL060W DAL2P25335 343 aa3.43□□□□□ -1.86
TSR1YDL060W FUN19P28003 413 aaPredicted RBP3.43□□□□□ -1.86
TSR1YDL060W IML3P38265 245 aa3.43□□□□□ -1.86
TSR1YDL060W MMS21P38632 267 aa3.43□□□□□ -1.86
TSR1YDL060W GOS1P38736 223 aa3.43□□□□□ -1.86
TSR1YDL060W YHK8P38776 514 aa3.43□□□□□ -1.86
TSR1YDL060W SBE22P38814 852 aa3.43□□□□□ -1.86
TSR1YDL060W NOP19P53317 196 aaPredicted RBP3.43□□□□□ -1.86
TSR1YDL060W YNL260CP53846 198 aa3.43□□□□□ -1.86
TSR1YDL060W RSN1Q03516 953 aa3.43□□□□□ -1.86
TSR1YDL060W YET3Q07451 203 aa3.43□□□□□ -1.86
TSR1YDL060W YLR031WQ07978 186 aa3.43□□□□□ -1.86
TSR1YDL060W BSC6Q08280 497 aa3.43□□□□□ -1.86
TSR1YDL060W SNU23Q12368 194 aaPredicted RBP3.43□□□□□ -1.86
TSR1YDL060W ECM29P38737 1868 aa3.42□□□□□ -1.86
TSR1YDL060W OPI3P05375 206 aa3.42□□□□□ -1.86
TSR1YDL060W YLL053CP0CD98 152 aa3.42□□□□□ -1.86
TSR1YDL060W BAR1P12630 587 aa3.42□□□□□ -1.86
TSR1YDL060W DAL81P21657 970 aa3.42□□□□□ -1.86
TSR1YDL060W DBR1P24309 405 aaKnown RBP3.42□□□□□ -1.86
TSR1YDL060W MSK1P32048 576 aa3.42□□□□□ -1.86
TSR1YDL060W CDC13P32797 924 aaKnown RBP3.42□□□□□ -1.86
TSR1YDL060W PDR3P33200 976 aa3.42□□□□□ -1.86
TSR1YDL060W ROT2P38138 954 aa3.42□□□□□ -1.86
TSR1YDL060W FET3P38993 636 aa3.42□□□□□ -1.86
TSR1YDL060W ERV46P39727 415 aa3.42□□□□□ -1.86
TSR1YDL060W YER079WP40052 210 aaKnown RBP3.42□□□□□ -1.86
TSR1YDL060W YIL060WP40519 144 aa3.42□□□□□ -1.86
TSR1YDL060W YJL016WP47072 561 aa3.42□□□□□ -1.86
TSR1YDL060W UBP8P50102 471 aa3.42□□□□□ -1.86
TSR1YDL060W ORC5P50874 479 aa3.42□□□□□ -1.86
TSR1YDL060W PMT5P52867 743 aa3.42□□□□□ -1.86
TSR1YDL060W YGR117CP53270 476 aa3.42□□□□□ -1.86
TSR1YDL060W TIM13P53299 105 aa3.42□□□□□ -1.86
TSR1YDL060W SMM1P53720 384 aaKnown RBP3.42□□□□□ -1.86
TSR1YDL060W GOR1P53839 350 aa3.42□□□□□ -1.86
TSR1YDL060W VHS1Q03785 461 aa3.42□□□□□ -1.86
TSR1YDL060W BRX1Q08235 291 aaKnown RBP3.42□□□□□ -1.86
TSR1YDL060W AHC1Q12433 566 aa3.42□□□□□ -1.86
TSR1YDL060W YGL194C-AQ2V2P6 80 aa3.42□□□□□ -1.86
TSR1YDL060W IPP1P00817 287 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W MSF1P08425 469 aa3.41□□□□□ -1.86
TSR1YDL060W CCA1P21269 546 aa3.41□□□□□ -1.86
TSR1YDL060W CNB1P25296 175 aa3.41□□□□□ -1.86
TSR1YDL060W DEG1P31115 442 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W VAM7P32912 316 aa3.41□□□□□ -1.86
TSR1YDL060W ECM13P38195 257 aa3.41□□□□□ -1.86
TSR1YDL060W AVT2P39981 480 aa3.41□□□□□ -1.86
TSR1YDL060W KRE29P40026 464 aa3.41□□□□□ -1.86
TSR1YDL060W YIL054WP40524 105 aa3.41□□□□□ -1.86
TSR1YDL060W YJL118WP47022 219 aa3.41□□□□□ -1.86
TSR1YDL060W LOH1P47055 219 aa3.41□□□□□ -1.86
TSR1YDL060W STE24P47154 453 aa3.41□□□□□ -1.86
TSR1YDL060W YIF1P53845 314 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W GIP3Q03016 1276 aa3.41□□□□□ -1.86
TSR1YDL060W MRPS17Q03246 237 aaPredicted RBP3.41□□□□□ -1.86
TSR1YDL060W YMR209CQ03648 457 aa3.41□□□□□ -1.86
TSR1YDL060W YDR387CQ04162 555 aa3.41□□□□□ -1.86
TSR1YDL060W RTN1Q04947 295 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W SPC2Q04969 178 aa3.41□□□□□ -1.86
TSR1YDL060W PAL1Q05518 499 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W INM2Q05533 292 aa3.41□□□□□ -1.86
TSR1YDL060W CTS2Q06350 511 aa3.41□□□□□ -1.86
TSR1YDL060W HKR1P41809 1802 aa3.41□□□□□ -1.86
TSR1YDL060W RAD7P06779 565 aa3.41□□□□□ -1.86
TSR1YDL060W RPS16AP0CX51 143 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W RPS16BP0CX52 143 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W RPL12AP0CX53 165 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W RPL12BP0CX54 165 aa3.41□□□□□ -1.86
TSR1YDL060W UBC8P28263 218 aa3.41□□□□□ -1.86
TSR1YDL060W ITR1P30605 584 aa3.41□□□□□ -1.86
TSR1YDL060W REC114P32841 428 aa3.41□□□□□ -1.86
TSR1YDL060W SRY1P36007 326 aa3.41□□□□□ -1.86
TSR1YDL060W EGD2P38879 174 aaKnown RBP3.41□□□□□ -1.86
TSR1YDL060W OTU1P43558 301 aa3.41□□□□□ -1.86
TSR1YDL060W YFL012WP43580 148 aa3.41□□□□□ -1.86
TSR1YDL060W SAD1P43589 448 aa3.41□□□□□ -1.86
TSR1YDL060W IRC7P43623 340 aa3.41□□□□□ -1.86
TSR1YDL060W YDL186WP48568 277 aa3.41□□□□□ -1.86
TSR1YDL060W YGR067CP53243 804 aa3.41□□□□□ -1.86
TSR1YDL060W RET3P53600 189 aa3.41□□□□□ -1.86
TSR1YDL060W KTR6P54070 446 aa3.41□□□□□ -1.86
TSR1YDL060W ARL3Q02804 198 aa3.41□□□□□ -1.86
TSR1YDL060W YMR279CQ03263 540 aa3.41□□□□□ -1.86
TSR1YDL060W BNA7Q04066 261 aa3.41□□□□□ -1.86
TSR1YDL060W AIM33Q04516 312 aa3.41□□□□□ -1.86
TSR1YDL060W AAD15Q08361 143 aa3.41□□□□□ -1.86
TSR1YDL060W BTS1Q12051 335 aa3.41□□□□□ -1.86
TSR1YDL060W FSH3Q99369 266 aa3.41□□□□□ -1.86
TSR1YDL060W TIM9O74700 87 aa3.4□□□□□ -1.86
TSR1YDL060W RPS3P05750 240 aaKnown RBP3.4□□□□□ -1.86
TSR1YDL060W GDH1P07262 454 aaKnown RBP3.4□□□□□ -1.86
TSR1YDL060W DST1P07273 309 aa3.4□□□□□ -1.86
TSR1YDL060W IMA3P0CW40 589 aa3.4□□□□□ -1.86
TSR1YDL060W IMA4P0CW41 589 aa3.4□□□□□ -1.86
TSR1YDL060W CDC23P16522 626 aa3.4□□□□□ -1.86
TSR1YDL060W RPI1P23250 407 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms