RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	RPN8	Q08723	338 aa	Known RBP	3.12	□□□□□ -1.91
RPN4	YDL020C	TY3B-G	Q99315	1547 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY1B-DR3	Q99231	1755 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	ADH1	P00330	348 aa	Known RBP	3.11	□□□□□ -1.91
RPN4	YDL020C	SPS100	P13130	326 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	BGL2	P15703	313 aa	Known RBP	3.11	□□□□□ -1.91
RPN4	YDL020C	YFL040W	P43562	540 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	VEL1	P53058	206 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	YGR018C	P53211	109 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	OKP1	P53298	406 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	ERV25	P54837	211 aa	Known RBP	3.11	□□□□□ -1.91
RPN4	YDL020C	YPL080C	Q02826	108 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	UBX2	Q04228	584 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	RDL2	Q08742	149 aa	Known RBP	3.11	□□□□□ -1.91
RPN4	YDL020C	MDS3	P53094	1487 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	PDR10	P51533	1564 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-LR1	P0C2J3	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-F	P0CX63	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-GR2	P0CX64	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-C	P25384	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-DR2	Q03494	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY1B-DR1	Q03855	1755 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-DR3	Q07791	1770 aa	Known RBP	3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-OR1	Q12113	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-DR1	Q12472	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	TY2B-OR2	Q12501	1770 aa		3.11	□□□□□ -1.91
RPN4	YDL020C	RAD23	P32628	398 aa	Known RBP	3.1	□□□□□ -1.91
RPN4	YDL020C	ZRT1	P32804	376 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	SMP1	P38128	452 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	GPI8	P49018	411 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	PNC1	P53184	216 aa	Known RBP	3.1	□□□□□ -1.91
RPN4	YDL020C	NRM1	P53718	249 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	MRX9	Q07349	420 aa	Known RBP	3.1	□□□□□ -1.91
RPN4	YDL020C	YLR012C	Q07927	99 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	MMT2	Q08970	484 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	MHP1	P43638	1398 aa		3.1	□□□□□ -1.91
RPN4	YDL020C	UGA1	P17649	471 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	EPT1	P22140	391 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	DSE1	P40077	573 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	PMT4	P46971	762 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	TPC1	P53257	314 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	SPO19	Q03029	223 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	ECM18	Q04623	453 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	PBP4	Q07362	185 aa	Known RBP	3.09	□□□□□ -1.91
RPN4	YDL020C	PRM4	Q12498	284 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	YIL002W-A	Q3E7Z5	69 aa		3.09	□□□□□ -1.91
RPN4	YDL020C	TY2B-B	Q12491	1770 aa		3.09	□□□□□ -1.92
RPN4	YDL020C	RPL5	P26321	297 aa	Known RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	SPS19	P32573	292 aa	Known RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
RPN4	YDL020C	RPC25	P35718	212 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	YHR035W	P38769	630 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	GGC1	P38988	300 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	SEO1	P39709	593 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	VHS1	Q03785	461 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	YLR413W	Q06689	675 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	YPQ1	Q12010	308 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	VPS15	P22219	1454 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	RAD7	P06779	565 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	RPC40	P07703	335 aa	Known RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	GAL7	P08431	366 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	PUT4	P15380	627 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	RCK1	P38622	512 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	EFM1	P38732	585 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	GCD14	P46959	383 aa	Predicted RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	SNX41	Q04053	625 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	API2	Q04413	109 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	APC4	Q04601	652 aa		3.08	□□□□□ -1.92
RPN4	YDL020C	DTD1	Q07648	150 aa	Known RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	MRPL23	Q12487	163 aa	Predicted RBP	3.08	□□□□□ -1.92
RPN4	YDL020C	NUP159	P40477	1460 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	SNT2	P53127	1403 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	YBT1	P32386	1661 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	ESC1	Q03661	1658 aa	Known RBP	3.07	□□□□□ -1.92
RPN4	YDL020C	STE2	D6VTK4	431 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	ERD1	P16151	362 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	MRPS9	P38120	278 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	TAE1	P38340	232 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	ECM34	P38728	170 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	RRT13	P40042	185 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	COX16	P47081	118 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	YGR266W	P53326	701 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	BIO4	P53630	237 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	EGD1	Q02642	157 aa	Known RBP	3.07	□□□□□ -1.92
RPN4	YDL020C	ERV41	Q04651	352 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	SIA1	Q12212	622 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	RAX2	Q12465	1220 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	DNF1	P32660	1571 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	VTH1	P40438	1549 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	VTH2	P40890	1549 aa		3.07	□□□□□ -1.92
RPN4	YDL020C	TPI1	P00942	248 aa	Known RBP	3.06	□□□□□ -1.92
RPN4	YDL020C	TIP20	P33891	701 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	MID2	P36027	376 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	YMR262W	P38430	313 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	MEP1	P40260	492 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	HIT1	P46973	164 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	SED5	Q01590	340 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	APC9	Q12107	265 aa		3.06	□□□□□ -1.92
RPN4	YDL020C	UTP23	Q12339	254 aa	Known RBP	3.06	□□□□□ -1.92
RPN4	YDL020C	SRB8	P25648	1427 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms