RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SPR28Q04921 423 aa5.09□□□□□ -1.59
SHM1YBR263W ARR2Q06597 130 aa5.09□□□□□ -1.59
SHM1YBR263W RRG7Q08774 242 aaPredicted RBP5.09□□□□□ -1.59
SHM1YBR263W MEC1P38111 2368 aa5.09□□□□□ -1.6
SHM1YBR263W ASF2P32448 525 aaPredicted RBP5.08□□□□□ -1.6
SHM1YBR263W CYS4P32582 507 aaKnown RBP5.08□□□□□ -1.6
SHM1YBR263W ECM15P35195 104 aa5.08□□□□□ -1.6
SHM1YBR263W YJL193WP39542 402 aa5.08□□□□□ -1.6
SHM1YBR263W SOK1P40317 901 aa5.08□□□□□ -1.6
SHM1YBR263W GCN20P43535 752 aaKnown RBP5.08□□□□□ -1.6
SHM1YBR263W ECO1P43605 281 aa5.08□□□□□ -1.6
SHM1YBR263W BAT2P47176 376 aaKnown RBP5.08□□□□□ -1.6
SHM1YBR263W YGR168CP53293 376 aa5.08□□□□□ -1.6
SHM1YBR263W PLM2Q04383 521 aa5.08□□□□□ -1.6
SHM1YBR263W MCP1Q12106 302 aa5.08□□□□□ -1.6
SHM1YBR263W DET1Q99288 334 aaKnown RBP5.08□□□□□ -1.6
SHM1YBR263W RPL7AP05737 244 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W PET494P07390 489 aaPredicted RBP5.07□□□□□ -1.6
SHM1YBR263W CAR2P07991 424 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W ERG8P24521 451 aa5.07□□□□□ -1.6
SHM1YBR263W TIM12P32830 109 aa5.07□□□□□ -1.6
SHM1YBR263W PPG1P32838 368 aa5.07□□□□□ -1.6
SHM1YBR263W ECM8P38246 354 aa5.07□□□□□ -1.6
SHM1YBR263W MTC4P38335 694 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W TDA11P38854 504 aa5.07□□□□□ -1.6
SHM1YBR263W CTF8P38877 133 aa5.07□□□□□ -1.6
SHM1YBR263W PTI1P39927 425 aaPredicted RBP5.07□□□□□ -1.6
SHM1YBR263W HXT9P40885 567 aa5.07□□□□□ -1.6
SHM1YBR263W VMA10P48836 114 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W RBG2P53295 368 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W HXT11P54862 567 aa5.07□□□□□ -1.6
SHM1YBR263W YSA1Q01976 231 aa5.07□□□□□ -1.6
SHM1YBR263W SEC13Q04491 297 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W YRA1Q12159 226 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W RPL7BQ12213 244 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W YPL119C-AQ3E751 87 aa5.07□□□□□ -1.6
SHM1YBR263W IPP1P00817 287 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W YOL162WP0CF19 215 aa5.07□□□□□ -1.6
SHM1YBR263W HNM1P19807 563 aa5.07□□□□□ -1.6
SHM1YBR263W PRP19P32523 503 aaKnown RBP5.07□□□□□ -1.6
SHM1YBR263W MDL1P33310 695 aa5.07□□□□□ -1.6
SHM1YBR263W TPO5P36029 618 aa5.07□□□□□ -1.6
SHM1YBR263W YBR285WP38354 144 aa5.07□□□□□ -1.6
SHM1YBR263W SIT1P39980 628 aa5.07□□□□□ -1.6
SHM1YBR263W YEL057CP39983 233 aa5.07□□□□□ -1.6
SHM1YBR263W ZRG8P40021 1076 aa5.07□□□□□ -1.6
SHM1YBR263W YGL235WP53071 178 aa5.07□□□□□ -1.6
SHM1YBR263W SNF12P53628 566 aa5.07□□□□□ -1.6
SHM1YBR263W ABZ2Q03266 374 aa5.07□□□□□ -1.6
SHM1YBR263W YDR249CQ03787 373 aa5.07□□□□□ -1.6
SHM1YBR263W SNX41Q04053 625 aa5.07□□□□□ -1.6
SHM1YBR263W SMP3Q04174 516 aa5.07□□□□□ -1.6
SHM1YBR263W MIX14Q04341 121 aa5.07□□□□□ -1.6
SHM1YBR263W SYO1Q07395 620 aa5.07□□□□□ -1.6
SHM1YBR263W GRC3Q07845 632 aa5.07□□□□□ -1.6
SHM1YBR263W ENB1Q08299 606 aa5.07□□□□□ -1.6
SHM1YBR263W SPC3Q12133 184 aa5.07□□□□□ -1.6
SHM1YBR263W SWM1Q12379 170 aa5.07□□□□□ -1.6
SHM1YBR263W CTA1P15202 515 aa5.06□□□□□ -1.6
SHM1YBR263W YPK2P18961 677 aa5.06□□□□□ -1.6
SHM1YBR263W BUD5P25300 642 aaPredicted RBP5.06□□□□□ -1.6
SHM1YBR263W HSP30P25619 332 aa5.06□□□□□ -1.6
SHM1YBR263W SNC1P31109 117 aa5.06□□□□□ -1.6
SHM1YBR263W SBE22P38814 852 aa5.06□□□□□ -1.6
SHM1YBR263W YHR180WP38868 163 aa5.06□□□□□ -1.6
SHM1YBR263W YER010CP40011 234 aa5.06□□□□□ -1.6
SHM1YBR263W YIL166CP40445 542 aa5.06□□□□□ -1.6
SHM1YBR263W QRI7P43122 407 aa5.06□□□□□ -1.6
SHM1YBR263W CHA4P43634 648 aa5.06□□□□□ -1.6
SHM1YBR263W COS1P53822 381 aa5.06□□□□□ -1.6
SHM1YBR263W ASI1P54074 624 aa5.06□□□□□ -1.6
SHM1YBR263W SPO19Q03029 223 aa5.06□□□□□ -1.6
SHM1YBR263W RNH1Q04740 348 aa5.06□□□□□ -1.6
SHM1YBR263W BUR2Q05949 395 aa5.06□□□□□ -1.6
SHM1YBR263W YPR127WQ06494 345 aa5.06□□□□□ -1.6
SHM1YBR263W RDR1Q08904 546 aa5.06□□□□□ -1.6
SHM1YBR263W YDL109CQ12103 647 aa5.06□□□□□ -1.6
SHM1YBR263W YHR214C-DP0CX93 97 aa5.05□□□□□ -1.6
SHM1YBR263W DPM1P14020 267 aaKnown RBP5.05□□□□□ -1.6
SHM1YBR263W TFS1P14306 219 aa5.05□□□□□ -1.6
SHM1YBR263W SCO1P23833 295 aa5.05□□□□□ -1.6
SHM1YBR263W EHD3P28817 500 aa5.05□□□□□ -1.6
SHM1YBR263W ATS1P31386 333 aa5.05□□□□□ -1.6
SHM1YBR263W RPP1P38786 293 aa5.05□□□□□ -1.6
SHM1YBR263W BFR1P38934 470 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SHM1YBR263W RRG9P40156 214 aa5.05□□□□□ -1.6
SHM1YBR263W YIL169CP40442 995 aa5.05□□□□□ -1.6
SHM1YBR263W EXG2P52911 562 aa5.05□□□□□ -1.6
SHM1YBR263W YNR062CP53748 327 aa5.05□□□□□ -1.6
SHM1YBR263W PDR16P53860 351 aaKnown RBP5.05□□□□□ -1.6
SHM1YBR263W COG5P53951 403 aa5.05□□□□□ -1.6
SHM1YBR263W COX20Q04935 205 aa5.05□□□□□ -1.6
SHM1YBR263W SNT309Q06091 175 aaPredicted RBP5.05□□□□□ -1.6
SHM1YBR263W HNT3Q08702 217 aa5.05□□□□□ -1.6
SHM1YBR263W YPL272CQ08984 517 aa5.05□□□□□ -1.6
SHM1YBR263W BTS1Q12051 335 aa5.05□□□□□ -1.6
SHM1YBR263W HER1Q12276 1246 aa5.05□□□□□ -1.6
SHM1YBR263W MHF1Q3E835 90 aa5.05□□□□□ -1.6
SHM1YBR263W MTR10Q99189 972 aa5.05□□□□□ -1.6
SHM1YBR263W TPK3P05986 398 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms