RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W SNX3Q08826 162 aaKnown RBP2.59□□□□□ -1.99
SWD3YBR175W YPL199CQ08954 240 aa2.59□□□□□ -1.99
SWD3YBR175W YCR024C-BQ3E7Z8 88 aa2.59□□□□□ -1.99
SWD3YBR175W NCB2Q92317 146 aa2.59□□□□□ -1.99
SWD3YBR175W TRM732Q03496 1420 aa2.59□□□□□ -2
SWD3YBR175W POX1P13711 748 aa2.58□□□□□ -2
SWD3YBR175W YAP1P19880 650 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W CSE1P33307 960 aa2.58□□□□□ -2
SWD3YBR175W MRX3P38172 270 aa2.58□□□□□ -2
SWD3YBR175W YBR137WP38276 179 aa2.58□□□□□ -2
SWD3YBR175W NPT1P39683 429 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W THO1P40040 218 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W YNL194CP40169 301 aa2.58□□□□□ -2
SWD3YBR175W JLP2P40206 208 aa2.58□□□□□ -2
SWD3YBR175W DFG10P40526 253 aa2.58□□□□□ -2
SWD3YBR175W DSN1P40568 576 aa2.58□□□□□ -2
SWD3YBR175W GDS1P41913 522 aa2.58□□□□□ -2
SWD3YBR175W PSA1P41940 361 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W WWM1P43582 211 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W PMT4P46971 762 aa2.58□□□□□ -2
SWD3YBR175W GLG2P47011 380 aa2.58□□□□□ -2
SWD3YBR175W HOC1P47124 396 aa2.58□□□□□ -2
SWD3YBR175W NBP1P52919 319 aaPredicted RBP2.58□□□□□ -2
SWD3YBR175W HCH1P53834 153 aa2.58□□□□□ -2
SWD3YBR175W CDC14Q00684 551 aa2.58□□□□□ -2
SWD3YBR175W PIR3Q03180 325 aa2.58□□□□□ -2
SWD3YBR175W YMR181CQ03231 154 aa2.58□□□□□ -2
SWD3YBR175W YDR209CQ03480 137 aa2.58□□□□□ -2
SWD3YBR175W SNX41Q04053 625 aa2.58□□□□□ -2
SWD3YBR175W YLR012CQ07927 99 aa2.58□□□□□ -2
SWD3YBR175W DDC1Q08949 612 aa2.58□□□□□ -2
SWD3YBR175W SRO7Q12038 1033 aa2.58□□□□□ -2
SWD3YBR175W TIP41Q12199 356 aa2.58□□□□□ -2
SWD3YBR175W CRC1Q12289 327 aa2.58□□□□□ -2
SWD3YBR175W YKL183C-AQ3E765 70 aa2.58□□□□□ -2
SWD3YBR175W LAG2Q92325 660 aa2.58□□□□□ -2
SWD3YBR175W TOR1P35169 2470 aa2.58□□□□□ -2
SWD3YBR175W XRN1P22147 1528 aaKnown RBP2.58□□□□□ -2
SWD3YBR175W PDR10P51533 1564 aa2.57□□□□□ -2
SWD3YBR175W SAL1D6W196 494 aa2.57□□□□□ -2
SWD3YBR175W RPL27AP0C2H6 136 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W RPL27BP0C2H7 136 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W YBR121C-AP0C5L4 52 aa2.57□□□□□ -2
SWD3YBR175W MTF1P14908 341 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W YMR31P19955 123 aa2.57□□□□□ -2
SWD3YBR175W RNA15P25299 296 aaPredicted RBP2.57□□□□□ -2
SWD3YBR175W POF1P25576 258 aa2.57□□□□□ -2
SWD3YBR175W CPR3P25719 182 aa2.57□□□□□ -2
SWD3YBR175W RPL16BP26785 198 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W ADE1P27616 306 aa2.57□□□□□ -2
SWD3YBR175W PEX3P28795 441 aa2.57□□□□□ -2
SWD3YBR175W PHA2P32452 334 aa2.57□□□□□ -2
SWD3YBR175W VPS21P36017 210 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W RIB5P38145 238 aa2.57□□□□□ -2
SWD3YBR175W YER184CP39961 794 aa2.57□□□□□ -2
SWD3YBR175W IDP2P41939 412 aa2.57□□□□□ -2
SWD3YBR175W YNL320WP42840 284 aa2.57□□□□□ -2
SWD3YBR175W IKS1P47042 667 aa2.57□□□□□ -2
SWD3YBR175W VEL1P53058 206 aa2.57□□□□□ -2
SWD3YBR175W CDH1P53197 566 aa2.57□□□□□ -2
SWD3YBR175W SWC4P53201 476 aa2.57□□□□□ -2
SWD3YBR175W MTQ1P53944 314 aa2.57□□□□□ -2
SWD3YBR175W ERG13P54839 491 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W YMR027WQ04371 470 aa2.57□□□□□ -2
SWD3YBR175W SEC13Q04491 297 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W GIM5Q04493 163 aa2.57□□□□□ -2
SWD3YBR175W FUS2Q05670 677 aa2.57□□□□□ -2
SWD3YBR175W CDC123Q05791 360 aa2.57□□□□□ -2
SWD3YBR175W CTR3Q06686 241 aa2.57□□□□□ -2
SWD3YBR175W CSM4Q08955 156 aa2.57□□□□□ -2
SWD3YBR175W UTP23Q12339 254 aaKnown RBP2.57□□□□□ -2
SWD3YBR175W CSR2Q12734 1121 aa2.57□□□□□ -2
SWD3YBR175W AI5_BETAQ9ZZX0 354 aa2.57□□□□□ -2
SWD3YBR175W SPS100P13130 326 aa2.56□□□□□ -2
SWD3YBR175W GLN3P18494 730 aa2.56□□□□□ -2
SWD3YBR175W AGA1P32323 725 aa2.56□□□□□ -2
SWD3YBR175W RAD5P32849 1169 aaPredicted RBP2.56□□□□□ -2
SWD3YBR175W TAF14P35189 244 aa2.56□□□□□ -2
SWD3YBR175W MCH2P36032 473 aa2.56□□□□□ -2
SWD3YBR175W YPC1P38298 316 aa2.56□□□□□ -2
SWD3YBR175W URA8P38627 578 aaPredicted RBP2.56□□□□□ -2
SWD3YBR175W MTC6P38849 526 aa2.56□□□□□ -2
SWD3YBR175W EGD2P38879 174 aaKnown RBP2.56□□□□□ -2
SWD3YBR175W COX14P39103 70 aa2.56□□□□□ -2
SWD3YBR175W COX15P40086 486 aa2.56□□□□□ -2
SWD3YBR175W ALG8P40351 577 aa2.56□□□□□ -2
SWD3YBR175W OST1P41543 476 aaKnown RBP2.56□□□□□ -2
SWD3YBR175W RPL10P41805 221 aaKnown RBP2.56□□□□□ -2
SWD3YBR175W ASG7P46993 209 aa2.56□□□□□ -2
SWD3YBR175W JHD2P47156 728 aaPredicted RBP2.56□□□□□ -2
SWD3YBR175W UBC13P52490 153 aa2.56□□□□□ -2
SWD3YBR175W YMR254CQ04838 102 aa2.56□□□□□ -2
SWD3YBR175W YDR222WQ04925 415 aa2.56□□□□□ -2
SWD3YBR175W NDE2Q07500 545 aa2.56□□□□□ -2
SWD3YBR175W ABP140Q08641 628 aaKnown RBP2.56□□□□□ -2
SWD3YBR175W RDL2Q08742 149 aaKnown RBP2.56□□□□□ -2
SWD3YBR175W ATX2Q12067 313 aa2.56□□□□□ -2
SWD3YBR175W TMS1Q12116 473 aa2.56□□□□□ -2
SWD3YBR175W RRP42Q12277 265 aaPredicted RBP2.56□□□□□ -2
SWD3YBR175W RPN6Q12377 434 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms