RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C NDT80P38830 627 aa3.72□□□□□ -1.81
NPL4YBR170C PTI1P39927 425 aaPredicted RBP3.72□□□□□ -1.81
NPL4YBR170C SWC4P53201 476 aa3.72□□□□□ -1.81
NPL4YBR170C PGA2P53903 129 aa3.72□□□□□ -1.81
NPL4YBR170C KTR6P54070 446 aa3.72□□□□□ -1.81
NPL4YBR170C OST6Q03723 332 aa3.72□□□□□ -1.81
NPL4YBR170C MYO5Q04439 1219 aaKnown RBP3.72□□□□□ -1.81
NPL4YBR170C MFG1Q07684 458 aa3.72□□□□□ -1.81
NPL4YBR170C GIS3Q12418 502 aa3.72□□□□□ -1.81
NPL4YBR170C TDH2P00358 332 aaKnown RBP3.71□□□□□ -1.82
NPL4YBR170C RPS14AP06367 137 aaKnown RBP3.71□□□□□ -1.82
NPL4YBR170C CTA1P15202 515 aa3.71□□□□□ -1.82
NPL4YBR170C SRB4P32569 687 aa3.71□□□□□ -1.82
NPL4YBR170C PDC2P32896 925 aa3.71□□□□□ -1.82
NPL4YBR170C YPC1P38298 316 aa3.71□□□□□ -1.82
NPL4YBR170C RPS14BP39516 138 aaKnown RBP3.71□□□□□ -1.82
NPL4YBR170C SOP4P39543 234 aaPredicted RBP3.71□□□□□ -1.82
NPL4YBR170C HEM14P40012 539 aa3.71□□□□□ -1.82
NPL4YBR170C UBC13P52490 153 aa3.71□□□□□ -1.82
NPL4YBR170C CLD1P53264 445 aa3.71□□□□□ -1.82
NPL4YBR170C CPD1P53314 239 aa3.71□□□□□ -1.82
NPL4YBR170C CRZ1P53968 678 aa3.71□□□□□ -1.82
NPL4YBR170C MCT1Q12283 360 aa3.71□□□□□ -1.82
NPL4YBR170C PRM4Q12498 284 aa3.71□□□□□ -1.82
NPL4YBR170C CPR3P25719 182 aa3.7□□□□□ -1.82
NPL4YBR170C MRPL6P32904 214 aa3.7□□□□□ -1.82
NPL4YBR170C CSE2P33308 149 aa3.7□□□□□ -1.82
NPL4YBR170C CBF5P33322 483 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
NPL4YBR170C ANR2P36090 516 aaPredicted RBP3.7□□□□□ -1.82
NPL4YBR170C NPT1P39683 429 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C AIM10P39965 576 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C EGT2P42835 1041 aa3.7□□□□□ -1.82
NPL4YBR170C BNS1P50084 137 aa3.7□□□□□ -1.82
NPL4YBR170C MRX9Q07349 420 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C PPT2Q12036 173 aa3.7□□□□□ -1.82
NPL4YBR170C MSH5Q12175 901 aa3.7□□□□□ -1.82
NPL4YBR170C ERV2Q12284 196 aa3.7□□□□□ -1.82
NPL4YBR170C HIS1P00498 297 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C MATALPHA1P0CY06 175 aa3.7□□□□□ -1.82
NPL4YBR170C HMLALPHA1P0CY07 175 aa3.7□□□□□ -1.82
NPL4YBR170C MRP1P10662 321 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C KTI12P34253 313 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C LSM12P38828 187 aaKnown RBP3.7□□□□□ -1.82
NPL4YBR170C DDI1P40087 428 aa3.7□□□□□ -1.82
NPL4YBR170C MOB2P43563 287 aa3.7□□□□□ -1.82
NPL4YBR170C AIM23P47015 356 aa3.7□□□□□ -1.82
NPL4YBR170C CDC14Q00684 551 aa3.7□□□□□ -1.82
NPL4YBR170C PBA1Q05778 276 aa3.7□□□□□ -1.82
NPL4YBR170C ATP16Q12165 160 aa3.7□□□□□ -1.82
NPL4YBR170C HMS1Q12398 434 aa3.7□□□□□ -1.82
NPL4YBR170C TFS1P14306 219 aa3.69□□□□□ -1.82
NPL4YBR170C CBS2P14905 389 aa3.69□□□□□ -1.82
NPL4YBR170C ERD1P16151 362 aa3.69□□□□□ -1.82
NPL4YBR170C RPS5P26783 225 aaKnown RBP3.69□□□□□ -1.82
NPL4YBR170C CSE1P33307 960 aa3.69□□□□□ -1.82
NPL4YBR170C LDB7P38210 180 aa3.69□□□□□ -1.82
NPL4YBR170C YIA6P40556 373 aa3.69□□□□□ -1.82
NPL4YBR170C TAD2P47058 250 aa3.69□□□□□ -1.82
NPL4YBR170C VHT1P53241 593 aa3.69□□□□□ -1.82
NPL4YBR170C MRPL50P53724 139 aa3.69□□□□□ -1.82
NPL4YBR170C FAR10Q06001 478 aa3.69□□□□□ -1.82
NPL4YBR170C GAS2Q06135 555 aa3.69□□□□□ -1.82
NPL4YBR170C TAZ1Q06510 381 aa3.69□□□□□ -1.82
NPL4YBR170C SFM1Q12314 213 aa3.69□□□□□ -1.82
NPL4YBR170C YPR064WQ12492 139 aa3.69□□□□□ -1.82
NPL4YBR170C YBR298C-AQ8TGK4 73 aa3.69□□□□□ -1.82
NPL4YBR170C POF1P25576 258 aa3.68□□□□□ -1.82
NPL4YBR170C DEP1P31385 405 aa3.68□□□□□ -1.82
NPL4YBR170C AIM29P36154 155 aa3.68□□□□□ -1.82
NPL4YBR170C PTH1P38876 190 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C CHL4P38907 458 aa3.68□□□□□ -1.82
NPL4YBR170C PEX22P39718 180 aa3.68□□□□□ -1.82
NPL4YBR170C ALD5P40047 520 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C YNL208WP40159 199 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C ATG18P43601 500 aa3.68□□□□□ -1.82
NPL4YBR170C YFR057WP43625 151 aa3.68□□□□□ -1.82
NPL4YBR170C CGR1P53188 120 aa3.68□□□□□ -1.82
NPL4YBR170C CDH1P53197 566 aa3.68□□□□□ -1.82
NPL4YBR170C CRH1P53301 507 aa3.68□□□□□ -1.82
NPL4YBR170C NOP13P53883 403 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
NPL4YBR170C ELP3Q02908 557 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C ENT5Q03769 411 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C GTO3Q04806 366 aa3.68□□□□□ -1.82
NPL4YBR170C FSH2Q05015 223 aa3.68□□□□□ -1.82
NPL4YBR170C ATG38Q05789 226 aaKnown RBP3.68□□□□□ -1.82
NPL4YBR170C RSA1Q08932 381 aa3.68□□□□□ -1.82
NPL4YBR170C TIP41Q12199 356 aa3.68□□□□□ -1.82
NPL4YBR170C RRP42Q12277 265 aaPredicted RBP3.68□□□□□ -1.82
NPL4YBR170C SPT4P32914 102 aaPredicted RBP3.67□□□□□ -1.82
NPL4YBR170C RCK1P38622 512 aa3.67□□□□□ -1.82
NPL4YBR170C SIP3P38717 1229 aa3.67□□□□□ -1.82
NPL4YBR170C PET8P38921 284 aa3.67□□□□□ -1.82
NPL4YBR170C VAC7P53950 1165 aa3.67□□□□□ -1.82
NPL4YBR170C YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
NPL4YBR170C JID1Q12350 301 aa3.67□□□□□ -1.82
NPL4YBR170C NAG1Q8TGN9 163 aa3.67□□□□□ -1.82
NPL4YBR170C JIP3O13555 125 aa3.67□□□□□ -1.82
NPL4YBR170C CDC36P06100 191 aaPredicted RBP3.67□□□□□ -1.82
NPL4YBR170C INO2P26798 304 aa3.67□□□□□ -1.82
NPL4YBR170C LDS1P31379 325 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms