RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	BPL1	P48445	690 aa	Predicted RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	CWC23	P52868	283 aa	Predicted RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	MAL12	P53341	584 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	NUP53	Q03790	475 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	MDM30	Q05930	598 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	UTP21	Q06078	939 aa	Predicted RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	TAZ1	Q06510	381 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	NGL1	Q08213	363 aa	Known RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	YOR376W	Q08900	122 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	YOR378W	Q08902	515 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	RDR1	Q08904	546 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	YDL176W	Q12027	708 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	THP3	Q12049	470 aa	Known RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	RLM1	Q12224	676 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	YOL114C	Q12322	202 aa		4.89	□□□□□ -1.63
UBC4	YBR082C	TY1A-NL1	Q12391	440 aa	Known RBP	4.89	□□□□□ -1.63
UBC4	YBR082C	FAS1	P07149	2051 aa	Known RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	AHC2	P25649	128 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	FUN26	P31381	517 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	ECT1	P33412	323 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	MSN4	P33749	630 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	RPP1	P38786	293 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	YJL218W	P40892	196 aa	Known RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	GDS1	P41913	522 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	YJL055W	P47044	245 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	IMD3	P50095	523 aa	Known RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	OCA1	P50946	238 aa	Predicted RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	PPT1	P53043	513 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	RAI1	P53063	387 aa	Known RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	MKC7	P53379	596 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	MPP6	P53725	186 aa	Predicted RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	NUP116	Q02630	1113 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	CGI121	Q03705	181 aa	Known RBP	4.88	□□□□□ -1.63
UBC4	YBR082C	YDR249C	Q03787	373 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	SNX41	Q04053	625 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	COX20	Q04935	205 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	BUR2	Q05949	395 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	GPN3	Q06543	272 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	BRE4	Q07660	1125 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	IRC19	Q07843	230 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	HRT1	Q08273	121 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	HNT3	Q08702	217 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	YPR1	Q12458	312 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	SET6	Q12529	373 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	YLR099W-A	Q3E798	87 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	SUS1	Q6WNK7	96 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	YBL113C	Q7M4S9	792 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	FMP27	Q06179	2628 aa		4.88	□□□□□ -1.63
UBC4	YBR082C	SIR2	P06700	562 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	PEP4	P07267	405 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	NFT1	P0CE68	1218 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	GAS1	P22146	559 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	AIM17	P23180	465 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	EXG1	P23776	448 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	PUT3	P25502	979 aa	Predicted RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	FUN19	P28003	413 aa	Predicted RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	RTG1	P32607	177 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	SEC66	P33754	206 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	YKR073C	P36153	106 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	THI2	P38141	450 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	YBR137W	P38276	179 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
UBC4	YBR082C	MLH1	P38920	769 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	FCY21	P40039	528 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	NAS2	P40555	220 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	SER2	P42941	309 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	BRR6	P53062	197 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	PAU12	P53343	120 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	PFA5	Q03289	374 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	TDA1	Q03533	586 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	MRPL1	Q04599	285 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	DFG5	Q05031	458 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	RBS1	Q05672	457 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	RRP9	Q06506	573 aa	Known RBP	4.87	□□□□□ -1.63
UBC4	YBR082C	AIM6	Q07716	390 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	PEX27	Q08580	376 aa		4.87	□□□□□ -1.63
UBC4	YBR082C	RPL40A	P0CH08	128 aa	Known RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	RPL40B	P0CH09	128 aa	Known RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	YHR214C-D	P0CX93	97 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	RPB8	P20436	146 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	PRE7	P23724	241 aa	Known RBP	4.86	□□□□□ -1.63
UBC4	YBR082C	BOS1	P25385	244 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	NAM9	P27929	486 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	EHD3	P28817	500 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	VPS17	P32913	551 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
UBC4	YBR082C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
UBC4	YBR082C	PAU24	P38155	120 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	APD1	P38281	316 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	OM14	P38325	134 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YHK8	P38776	514 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YER184C	P39961	794 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	MIT1	P40002	666 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	YER010C	P40011	234 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	AIM20	P40451	204 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	ATG18	P43601	500 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	NIT2	P47016	307 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	PGU1	P47180	361 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	RPA14	P50106	137 aa		4.86	□□□□□ -1.63
UBC4	YBR082C	SAY1	P53324	424 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 78 ms