RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 APOBEC2Q9Y235 224 aaKnown RBP19.79■□□□□ 0.76
VARS2-209ENST00000477288 ST13P4Q8IZP2 240 aaPredicted RBP19.79■□□□□ 0.76
VARS2-209ENST00000477288 SP110Q9HB58 689 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 PLAAQ9Y263 795 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 SPP2Q13103 211 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 WDR75Q8IWA0 830 aaKnown RBP19.79■□□□□ 0.76
VARS2-209ENST00000477288 CCNYL1Q8N7R7 359 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 CCDC90BQ9GZT6 254 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 GABBR1Q9UBS5 961 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 COPS2P61201 443 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 YAF2Q8IY57 180 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 ZSCAN9O15535 394 aaPredicted RBP19.79■□□□□ 0.76
VARS2-209ENST00000477288 MDM2Q00987 491 aaPredicted RBP19.79■□□□□ 0.76
VARS2-209ENST00000477288 RBBP7Q16576 425 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 CASS4Q9NQ75 786 aa19.79■□□□□ 0.76
VARS2-209ENST00000477288 FCER1AP12319 257 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 PRDX5P30044 214 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 HOXA7P31268 230 aaPredicted RBP19.78■□□□□ 0.76
VARS2-209ENST00000477288 KRT31Q15323 416 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 TTC23LQ6PF05 361 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 XXYLT1Q8NBI6 393 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 RBM41Q96IZ5 413 aaKnown RBP19.78■□□□□ 0.76
VARS2-209ENST00000477288 ACAP3Q96P50 834 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 CEP70Q8NHQ1 597 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 NR3C1P04150 777 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 RAP1GDS1P52306 607 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 EIF3BP55884 814 aaKnown RBP19.78■□□□□ 0.76
VARS2-209ENST00000477288 KRT76Q01546 638 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 SPARCL1Q14515 664 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 TBC1D9BQ66K14 1250 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 SPON2Q9BUD6 331 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 SNX24Q9Y343 169 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 UNC13DQ70J99 1090 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 RASSF3Q86WH2 238 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 POLR3FQ9H1D9 316 aaPredicted RBP19.78■□□□□ 0.76
VARS2-209ENST00000477288 CHCHD3Q9NX63 227 aaKnown RBP19.78■□□□□ 0.76
VARS2-209ENST00000477288 RCOR1Q9UKL0 485 aa19.78■□□□□ 0.76
VARS2-209ENST00000477288 ALS2CLQ60I27 953 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 RCSD1Q6JBY9 416 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 CLEC4GQ6UXB4 293 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 RGS9BPQ6ZS82 235 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 VSTM4Q8IW00 320 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 TTC8Q8TAM2 541 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 NAF1Q96HR8 494 aaKnown RBP19.77■□□□□ 0.76
VARS2-209ENST00000477288 CENPKQ9BS16 269 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 GCOM2Q9BZD3 368 aaPredicted RBP19.77■□□□□ 0.76
VARS2-209ENST00000477288 E9PMD0 336 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 PCSK1NQ9UHG2 260 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 TTC7AQ9ULT0 858 aaPredicted RBP19.77■□□□□ 0.76
VARS2-209ENST00000477288 CHD1O14646 1710 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 CFAP69A5D8W1 941 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 H0Y3Z8 333 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 GYG2O15488 501 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 PRPF4O43172 522 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■□□□ 13.9
VARS2-209ENST00000477288 FAM47EQ6ZV65 393 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 KPNA7A9QM74 516 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 PALMO75781 387 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 TFDP2Q14188 446 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 FSCBQ5H9T9 825 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 PBXIP1Q96AQ6 731 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 STRBPQ96SI9 672 aaKnown RBP19.77■□□□□ 0.76
VARS2-209ENST00000477288 C11orf70Q9BRQ4 267 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 TMEM260Q9NX78 707 aa19.77■□□□□ 0.76
VARS2-209ENST00000477288 CALB1P05937 261 aa19.77■□□□□ 0.75
VARS2-209ENST00000477288 CCDC85BQ15834 202 aaPredicted RBP19.77■□□□□ 0.75
VARS2-209ENST00000477288 TAS2R42Q7RTR8 314 aa19.77■□□□□ 0.75
VARS2-209ENST00000477288 MAGEB5Q9BZ81 275 aa19.77■□□□□ 0.75
VARS2-209ENST00000477288 C2orf40Q9H1Z8 148 aa19.77■□□□□ 0.75
VARS2-209ENST00000477288 NDFIP2Q9NV92 336 aa19.77■□□□□ 0.75
VARS2-209ENST00000477288 SDC4P31431 198 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 AP1B1Q10567 949 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 ZC3H18Q86VM9 953 aaKnown RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 RNF135Q8IUD6 432 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 DYRK4Q9NR20 520 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 FAM217BQ9NTX9 383 aaPredicted RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 CDV3Q9UKY7 258 aaKnown RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 OTULINQ96BN8 352 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 ZMAT2Q96NC0 199 aaKnown RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 TRIM45Q9H8W5 580 aaPredicted RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 ACTR5Q9H9F9 607 aaPredicted RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 CD209Q9NNX6 404 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 NEDD4P46934 1319 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 TET3O43151 1660 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 NMT2O60551 498 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 DCTN3O75935 186 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 CYP2E1P05181 493 aaPredicted RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 CACNB2Q08289 660 aaPredicted RBP19.76■□□□□ 0.75
VARS2-209ENST00000477288 ABCB6Q9NP58 842 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 STRIP2Q9ULQ0 834 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 RASA4BC9J798 803 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 RASA4O43374 803 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 ATP8B1O43520 1251 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 RAD54LQ92698 747 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 STAP1Q9ULZ2 295 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 MINPP1Q9UNW1 487 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 SNX5Q9Y5X3 404 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 LARGE1O95461 756 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 OCA2Q04671 838 aa19.76■□□□□ 0.75
VARS2-209ENST00000477288 ARHGEF1Q92888 912 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms