RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 RINT1Q6NUQ1 792 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 SFR1Q86XK3 245 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 ZNF280CQ8ND82 737 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 WDR11Q9BZH6 1224 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 ISCUQ9H1K1 167 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 SSC5DA1L4H1 1573 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 TRAF5O00463 557 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 VWA5AO00534 786 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 EZRP15311 586 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 CACNA2D3Q8IZS8 1091 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 UPF1Q92900 1129 aaKnown RBP eCLIP14.36□□□□□ -0.111e-7■■■■■ 49.3
SCAMP4-207ENST00000472442 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 TLR2O60603 784 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 MYBP10242 640 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 NAB2Q15742 525 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 SLC9C1Q4G0N8 1177 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 MCF2L2Q86YR7 1114 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 GPC2Q8N158 579 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 RAPGEF5Q92565 580 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 KLRG1Q96E93 195 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 NEUROG2Q9H2A3 272 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 RIPK3Q9Y572 518 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 ZHX2Q9Y6X8 837 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 RLFQ13129 1914 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 PPP2R2AP63151 447 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 UBLCP1Q8WVY7 318 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 PACSIN1Q9BY11 444 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 PCDHGC5Q9Y5F6 944 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 COL4A3BPQ9Y5P4 624 aa14.35□□□□□ -0.11
SCAMP4-207ENST00000472442 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 DHX15O43143 795 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 BCRP11274 1271 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 CLNS1AP54105 237 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 KCNMA1Q12791 1236 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 ENOX2Q16206 610 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 DLK2Q6UY11 383 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 C1orf186Q6ZWK4 172 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 ZC3H3Q8IXZ2 948 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PKD2L1Q9P0L9 805 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 NOVA2Q9UNW9 492 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 CCDC189A1A4V9 331 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 KCNK3O14649 394 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 LMNB1P20700 586 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PAX7P23759 505 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 HMGCS2P54868 508 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 ARID5AQ03989 594 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PTPROQ16827 1216 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PCNX4Q63HM2 1172 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 KIRREL3Q8IZU9 778 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 REPS2Q8NFH8 660 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 LRRC45Q96CN5 670 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 RIT2Q99578 217 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 TEKT3Q9BXF9 490 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 FBXL5Q9UKA1 691 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 UBIAD1Q9Y5Z9 338 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 C5orf60A6NFR6 353 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 DDX39AO00148 427 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 BIRC3Q13489 604 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 EPHA7Q15375 998 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 TKFCQ3LXA3 575 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 SFMBT2Q5VUG0 894 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 RUFY4Q6ZNE9 571 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 TAF4BQ92750 862 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 TATDN2Q93075 761 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 GOLPH3Q9H4A6 298 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 AS3MTQ9HBK9 375 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 TMEM59LQ9UK28 342 aa14.34□□□□□ -0.11
SCAMP4-207ENST00000472442 ZBED4O75132 1171 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 SERPING1P05155 500 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 EIF2AK2P19525 551 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 FLT3P36888 993 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 XRCC4Q13426 336 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 CUL1Q13616 776 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 GKAP1Q5VSY0 366 aaPredicted RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 CEP63Q96MT8 703 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 MAGOHP61326 146 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms