RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 UBA7P41226 1012 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 RARSP54136 660 aaKnown RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 DSTNP60981 165 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 HSPA14Q0VDF9 509 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 ZC3H12BQ5HYM0 836 aaKnown RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 WDR45BQ5MNZ6 344 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 FOXR1Q6PIV2 292 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 CATSPER4Q7RTX7 472 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 GLYCTKQ8IVS8 523 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 ZNF687Q8N1G0 1237 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 NKAIN3Q8N8D7 197 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 SPATA18Q8TC71 538 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 U2AF1L4Q8WU68 220 aaKnown RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 IPCEF1Q8WWN9 437 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 FOXJ1Q92949 421 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 SKA1Q96BD8 255 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 HNRNPABQ99729 332 aaKnown RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 TTPALQ9BTX7 342 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 YIPF3Q9GZM5 350 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 SMARCAD1Q9H4L7 1026 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 DNAJC18Q9H819 358 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 POLMQ9NP87 494 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 ATAD3AQ9NVI7 634 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 MOCS1Q9NZB8 636 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 WDR35Q9P2L0 1181 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 EPS15L1Q9UBC2 864 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 MYO1AQ9UBC5 1043 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 FBXO2Q9UK22 296 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 PA2G4Q9UQ80 394 aaKnown RBP4.49□□□□□ -1.69
PTPN22-202ENST00000420377 SNX5Q9Y5X3 404 aa4.49□□□□□ -1.69
PTPN22-202ENST00000420377 TNKSO95271 1327 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PDS5AQ29RF7 1337 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 TRIM43BA6NCK2 446 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 ADAMTS4O75173 837 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 TADA3O75528 432 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 RASSF9O75901 435 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 DXOO77932 396 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 CSPG5O95196 566 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 LUC7L3O95232 432 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 NPTXRO95502 500 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 HMGCRP04035 888 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 ALDH2P05091 517 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 SCTRP47872 440 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 NLRP5P59047 1200 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 EIF4A1P60842 406 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 CYP4A11Q02928 519 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 IFFO1Q0D2I5 559 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 RAB30Q15771 203 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 KRT71Q3SY84 523 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 METTL11BQ5VVY1 283 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 NCAPH2Q6IBW4 605 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PLBD1Q6P4A8 553 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 YTHDF3Q7Z739 585 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 SESTD1Q86VW0 696 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 FAM20CQ8IXL6 584 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 C17orf53Q8N3J3 647 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 CCDC155Q8N6L0 562 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 MAIP1Q8WWC4 291 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PGBD4Q96DM1 585 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 NRBF2Q96F24 287 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 SAMD11Q96NU1 681 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 FNBP1Q96RU3 617 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 NIFKQ9BYG3 293 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 SEMA6BQ9H3T3 888 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 SERHL2Q9H4I8 314 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 HYPKQ9NX55 129 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 DNAI1Q9UI46 699 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 RCAN3Q9UKA8 241 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 FAM169AQ9Y6X4 670 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 ALPK3Q96L96 1907 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GPR75-ASB3A0A0A6YYF3 556 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 CLRN2A0PK11 232 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 FRMD3A2A2Y4 597 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 DCDC2CA8MYV0 355 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 IGF2BP3O00425 579 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 ZSCAN12O43309 604 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PDE8AO60658 829 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 DKK1O94907 266 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 ARIH2O95376 493 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 A1BGP04217 495 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 TUBB4AP04350 444 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 LINGO3P0C6S8 592 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 VAMP1P23763 118 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 MAPK1P28482 360 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 PBX2P40425 430 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GPC3P51654 580 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 KPNA1P52294 538 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GEMIN4P57678 1058 aaKnown RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GNAI1P63096 354 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GABREP78334 506 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 GBE1Q04446 702 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 RELQ04864 619 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-202ENST00000420377 RUNX1T1Q06455 604 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 KIF5AQ12840 1032 aa4.48□□□□□ -1.69
PTPN22-202ENST00000420377 BLMHQ13867 455 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms