RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 PKP1Q13835 747 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 KNOP1Q1ED39 458 aaKnown RBP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 RCSD1Q6JBY9 416 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 TEKT4Q8WW24 435 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 STRBPQ96SI9 672 aaKnown RBP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 RMDN3Q96TC7 470 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 A0A1W2PQC6 194 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 CREB3O43889 395 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 PALMO75781 387 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ARFIP2P53365 341 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 PMS2P54278 862 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 CDO1Q16878 200 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 C1orf146Q5VVC0 180 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 RRM2BQ7LG56 351 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 SCFD1Q8WVM8 642 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ZBED2Q9BTP6 218 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 G3BP2Q9UN86 482 aaKnown RBP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 SMAPO00193 183 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ADRA2BP18089 450 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 QARSP47897 775 aaKnown RBP11.42□□□□□ -0.58
LTBP1-204ENST00000407925 SERPINB10P48595 397 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 BCAR1P56945 870 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ALX1Q15699 326 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 UBE2SQ16763 222 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 C2orf69Q8N8R5 385 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 WWP1Q9H0M0 922 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 VPS11Q9H270 941 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 KIF17Q9P2E2 1029 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 ZHX2Q9Y6X8 837 aa11.42□□□□□ -0.58
LTBP1-204ENST00000407925 NEMP1O14524 444 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 APOA1P02647 267 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 IL10P22301 178 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 NEK2P51955 445 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 PPP2R2AP63151 447 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 PRAMEP78395 509 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TBC1D1Q86TI0 1168 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 FOXP3Q9BZS1 431 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 A0A1B0GW55 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 FAM170AA1A519 330 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L2P0CJ85 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L3P0CJ86 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L4P0CJ87 422 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L5P0CJ88 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L6P0CJ89 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4L7P0CJ90 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ROR1Q01973 937 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TMED1Q13445 227 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 MXD4Q14582 209 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 STAT4Q14765 748 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 RARS2Q5T160 578 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 EXT2Q93063 718 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 SNF8Q96H20 258 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TNIP3Q96KP6 325 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TLR7Q9NYK1 1049 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 WDR35Q9P2L0 1181 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 DUX4Q9UBX2 424 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ZFYVE16Q7Z3T8 1539 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 PNMA6AP0CW24 399 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 RALAP11233 206 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 PSMC5P62195 406 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 UGP2Q16851 508 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TRIM60Q495X7 471 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 TWF2Q6IBS0 349 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 GMNCA6NCL1 334 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 H7C1W4 665 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 PRKAB2O43741 272 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 USP11P51784 963 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 VAMP7P51809 220 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 RASGRF1Q13972 1273 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 APOBEC3FQ8IUX4 373 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 ALKBH8Q96BT7 664 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 FOPNLQ96NB1 174 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 FAM49AQ9H0Q0 323 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 SP110Q9HB58 689 aa11.41□□□□□ -0.58
LTBP1-204ENST00000407925 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
LTBP1-204ENST00000407925 NSUN2Q08J23 767 aaKnown RBP eCLIP11.4□□□□□ -0.58
LTBP1-204ENST00000407925 KCNH2Q12809 1159 aa11.4□□□□□ -0.58
LTBP1-204ENST00000407925 TMEM270Q6UE05 265 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms