RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Nlrp5Q9R1M5 1163 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Bub1bQ9Z1S0 1052 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Spocd1B1ASB6 936 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Maml3D4QGC2 1135 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rfpl4bJ3QPR6 266 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Hcls1P49710 486 aaKnown RBP8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rpusd2Q149F1 553 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nsun7Q14AW5 724 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rapgef1Q3UHC1 1224 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Kif5bQ61768 963 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Hdac10Q6P3E7 666 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 GmipQ6PGG2 971 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lca5Q80ST9 704 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ece2Q80Z60 881 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pramel6Q810Y9 485 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 DcakdQ8BHC4 231 aaKnown RBP8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nudt13Q8JZU0 352 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ero1aQ8R180 464 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slc35c2Q8VCX2 364 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cbwd1Q8VEH6 393 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ccdc91Q9D8L5 442 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Trip6Q9Z1Y4 480 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mmrn1B2RPV6 1210 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ccdc6D3YZP9 469 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Il15P48346 162 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Aqp8P56404 261 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Spg7Q3ULF4 781 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dhx37Q6NZL1 1150 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 HltfQ6PCN7 1003 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 AdalQ80SY6 360 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 C2cd2lQ80X80 706 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Psmd5Q8BJY1 504 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Acbd3Q8BMP6 525 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lrrc4cQ8C031 640 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 N4bp3Q8C7U1 537 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dennd1aQ8K382 1016 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cacnb1Q8R3Z5 597 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Txndc9Q9CQ79 226 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nap1l5Q9JJF0 156 aa8.89□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Orc4O88708 433 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rab21P35282 222 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Eva1cP58659 440 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rps8P62242 208 aaKnown RBP8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Traf5P70191 558 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 FerP70451 823 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Oca2Q62052 833 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Phc1Q64028 1012 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Krt12Q64291 487 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ppp1r12bQ8BG95 976 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slc4a8Q8JZR6 1089 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Erich5Q8K0S2 362 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rassf9Q8K342 435 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Q91Z58 1206 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 StambpQ9CQ26 424 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mmrn2A6H6E2 943 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slfn8B1ARD8 910 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rasal2E9PW37 1286 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 PtenO08586 403 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ap1b1O35643 943 aaKnown RBP8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Stmn4P63042 189 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Snai1Q02085 264 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dact3Q0PHV7 610 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 VrtnQ3SYK4 740 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dcaf17Q3TUL7 519 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Muc3aQ3U5A2 218 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cnpy1Q4VAB4 94 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 GnptabQ69ZN6 1235 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ddx19bQ8BZY3 494 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 HibchQ8QZS1 385 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slc39a3Q99K24 317 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 IkbipQ9DBZ1 373 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Trmt112Q9DCG9 125 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Add1Q9QYC0 735 aaKnown RBP8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Arhgef10lA2AWP8 1280 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ebf2O08792 575 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Kcnu1O54982 1121 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pdk4O70571 412 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Psmc2P46471 433 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Usp46P62069 366 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rbm46P86049 533 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gdf10P97737 476 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lrrc36Q3V0M2 755 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ndufaf2Q59J78 168 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ccdc92bQ5SUE3 299 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Krt15Q61414 452 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Itih3Q61704 889 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cfap206Q6PE87 622 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 OtoaQ8K561 1137 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cdk8Q8R3L8 464 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slc14a2Q8R4T9 930 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 CbsQ91WT9 561 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ces1fQ91WU0 561 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pdxdc1Q99K01 787 aaKnown RBP8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ppp1r3aQ99MR9 1089 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ergic2Q9CR89 377 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Golga1Q9CW79 758 aa8.88□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Kndc1Q0KK55 1742 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nme9A0A1L1SUL6 329 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nup62clA2AG10 272 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gm2030D3Z7C4 212 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms