RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 TPC1P53257 314 aa1.51□□□□□ -2.17
snR54snR54 DIB1Q06819 143 aaPredicted RBP1.51□□□□□ -2.17
snR54snR54 YOR012WQ12351 137 aa1.51□□□□□ -2.17
snR54snR54 HPR1P17629 752 aaKnown RBP1.5□□□□□ -2.17
snR54snR54 PHO84P25297 587 aaKnown RBP1.5□□□□□ -2.17
snR54snR54 MDL1P33310 695 aa1.5□□□□□ -2.17
snR54snR54 MRPS5P33759 307 aa1.5□□□□□ -2.17
snR54snR54 YBL028CP38202 106 aa1.5□□□□□ -2.17
snR54snR54 RFT1P38206 574 aaPredicted RBP1.5□□□□□ -2.17
snR54snR54 YPL113CQ02961 396 aa1.5□□□□□ -2.17
snR54snR54 NAT4Q04751 285 aa1.5□□□□□ -2.17
snR54snR54 DXO1Q06349 442 aa1.5□□□□□ -2.17
snR54snR54 ARR1Q06596 294 aa1.5□□□□□ -2.17
snR54snR54 YFH1Q07540 174 aa1.5□□□□□ -2.17
snR54snR54 MET2P08465 486 aa1.49□□□□□ -2.17
snR54snR54 UTR1P21373 530 aa1.49□□□□□ -2.17
snR54snR54 MRPL20P22354 195 aaPredicted RBP1.49□□□□□ -2.17
snR54snR54 RGM1Q00453 211 aa1.49□□□□□ -2.17
snR54snR54 RRB1Q04225 511 aaKnown RBP1.49□□□□□ -2.17
snR54snR54 CLP1Q08685 445 aaPredicted RBP1.49□□□□□ -2.17
snR54snR54 YPL264CQ08980 353 aa1.49□□□□□ -2.17
snR54snR54 YPR063CQ12160 140 aa1.49□□□□□ -2.17
snR54snR54 MHP1P43638 1398 aa1.48□□□□□ -2.17
snR54snR54 RAD1P06777 1100 aa1.48□□□□□ -2.17
snR54snR54 CTA1P15202 515 aa1.48□□□□□ -2.17
snR54snR54 ARF2P19146 181 aaKnown RBP1.48□□□□□ -2.17
snR54snR54 MXR2P25566 168 aa1.48□□□□□ -2.17
snR54snR54 INO2P26798 304 aa1.48□□□□□ -2.17
snR54snR54 YGL118CP53132 145 aa1.48□□□□□ -2.17
snR54snR54 MPS2P53159 387 aa1.48□□□□□ -2.17
snR54snR54 RSC1P53236 928 aa1.48□□□□□ -2.17
snR54snR54 MIM1Q08176 113 aa1.48□□□□□ -2.17
snR54snR54 APC5Q08683 685 aa1.48□□□□□ -2.17
snR54snR54 SGT2Q12118 346 aaKnown RBP1.48□□□□□ -2.17
snR54snR54 KRE1P17260 313 aa1.47□□□□□ -2.17
snR54snR54 YSW1P38280 609 aa1.47□□□□□ -2.17
snR54snR54 LRP1P38801 184 aaKnown RBP1.47□□□□□ -2.17
snR54snR54 GDI1P39958 451 aaKnown RBP1.47□□□□□ -2.17
snR54snR54 YER084WP40057 128 aa1.47□□□□□ -2.17
snR54snR54 DSE1P40077 573 aa1.47□□□□□ -2.17
snR54snR54 YIL054WP40524 105 aa1.47□□□□□ -2.17
snR54snR54 HSH155P49955 971 aaKnown RBP1.47□□□□□ -2.17
snR54snR54 YNR068CP53754 272 aa1.47□□□□□ -2.17
snR54snR54 YPL080CQ02826 108 aa1.47□□□□□ -2.17
snR54snR54 CSI1Q04368 295 aa1.47□□□□□ -2.17
snR54snR54 RLP24Q07915 199 aaKnown RBP1.47□□□□□ -2.17
snR54snR54 SFG1Q12507 346 aa1.47□□□□□ -2.17
snR54snR54 TDH2P00358 332 aaKnown RBP1.46□□□□□ -2.18
snR54snR54 TDH3P00359 332 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
snR54snR54 MAS1P10507 462 aa1.46□□□□□ -2.18
snR54snR54 ITR2P30606 609 aa1.46□□□□□ -2.18
snR54snR54 YPS1P32329 569 aa1.46□□□□□ -2.18
snR54snR54 ARO4P32449 370 aaKnown RBP1.46□□□□□ -2.18
snR54snR54 YBL081WP38180 368 aaKnown RBP1.46□□□□□ -2.18
snR54snR54 IML3P38265 245 aa1.46□□□□□ -2.18
snR54snR54 MED6P38782 295 aa1.46□□□□□ -2.18
snR54snR54 SLM1P40485 686 aa1.46□□□□□ -2.18
snR54snR54 MIC19P43594 170 aa1.46□□□□□ -2.18
snR54snR54 VPS9P54787 451 aa1.46□□□□□ -2.18
snR54snR54 SXM1Q04175 944 aaKnown RBP1.46□□□□□ -2.18
snR54snR54 SPH1Q06160 661 aa1.46□□□□□ -2.18
snR54snR54 GLE1Q12315 538 aa1.46□□□□□ -2.18
snR54snR54 SPS100P13130 326 aa1.45□□□□□ -2.18
snR54snR54 DAP2P18962 818 aa1.45□□□□□ -2.18
snR54snR54 CDC42P19073 191 aa1.45□□□□□ -2.18
snR54snR54 FAA1P30624 700 aaKnown RBP1.45□□□□□ -2.18
snR54snR54 YKR032WP36127 104 aa1.45□□□□□ -2.18
snR54snR54 SEC28P40509 296 aaKnown RBP1.45□□□□□ -2.18
snR54snR54 ECO1P43605 281 aa1.45□□□□□ -2.18
snR54snR54 BUD13P46947 266 aaPredicted RBP1.45□□□□□ -2.18
snR54snR54 YHC3P47040 408 aa1.45□□□□□ -2.18
snR54snR54 SDS23P53172 527 aa1.45□□□□□ -2.18
snR54snR54 UTP6Q02354 440 aaKnown RBP1.45□□□□□ -2.18
snR54snR54 YDR114CQ04597 100 aa1.45□□□□□ -2.18
snR54snR54 TFC7Q12415 435 aa1.45□□□□□ -2.18
snR54snR54 TFB5Q3E7C1 72 aaPredicted RBP1.45□□□□□ -2.18
snR54snR54 RPL6BP05739 176 aaKnown RBP1.44□□□□□ -2.18
snR54snR54 SNF6P18888 332 aa1.44□□□□□ -2.18
snR54snR54 UBA1P22515 1024 aaKnown RBP1.44□□□□□ -2.18
snR54snR54 ERG9P29704 444 aa1.44□□□□□ -2.18
snR54snR54 YKL187CP34231 750 aa1.44□□□□□ -2.18
snR54snR54 MED8P38304 223 aa1.44□□□□□ -2.18
snR54snR54 YFR045WP43617 309 aa1.44□□□□□ -2.18
snR54snR54 PMT4P46971 762 aa1.44□□□□□ -2.18
snR54snR54 RPL6AQ02326 176 aaKnown RBP1.44□□□□□ -2.18
snR54snR54 YMR310CQ04867 317 aaPredicted RBP1.44□□□□□ -2.18
snR54snR54 THR4P16120 514 aaKnown RBP1.43□□□□□ -2.18
snR54snR54 SMF2P38778 549 aa1.43□□□□□ -2.18
snR54snR54 ASP1P38986 381 aaPredicted RBP1.43□□□□□ -2.18
snR54snR54 ACT1P60010 375 aaKnown RBP1.43□□□□□ -2.18
snR54snR54 CDD1Q06549 142 aa1.43□□□□□ -2.18
snR54snR54 FEX1Q08913 375 aa1.43□□□□□ -2.18
snR54snR54 FEX2Q08991 375 aa1.43□□□□□ -2.18
snR54snR54 IES3Q12345 250 aa1.43□□□□□ -2.18
snR54snR54 TRM10Q12400 293 aa1.43□□□□□ -2.18
snR54snR54 REP1P03871 373 aa1.42□□□□□ -2.18
snR54snR54 CIN8P27895 1000 aa1.42□□□□□ -2.18
snR54snR54 HMX1P32339 317 aa1.42□□□□□ -2.18
snR54snR54 KTI12P34253 313 aaKnown RBP1.42□□□□□ -2.18
snR54snR54 ATG12P38316 186 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms