RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	RPS0A	P32905	252 aa	Known RBP	4.67	□□□□□ -1.66
UBA3	YPR066W	QDR3	P38227	689 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	SMF2	P38778	549 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	SHO1	P40073	367 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	SCC4	P40090	624 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	PHB2	P50085	310 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	SWC4	P53201	476 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	NRM1	P53718	249 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	YNL143C	P53908	130 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	VTI1	Q04338	217 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	YML096W	Q04489	525 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	REX4	Q08237	289 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	SKI7	Q08491	747 aa	Predicted RBP	4.67	□□□□□ -1.66
UBA3	YPR066W	ATG34	Q12292	412 aa		4.67	□□□□□ -1.66
UBA3	YPR066W	NDC1	P32500	655 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	IMP3	P32899	183 aa	Predicted RBP	4.66	□□□□□ -1.66
UBA3	YPR066W	CSE1	P33307	960 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	LDB7	P38210	180 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	INM1	P38710	295 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	MNL1	P38888	796 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	DHH1	P39517	506 aa	Known RBP	4.66	□□□□□ -1.66
UBA3	YPR066W	UTP6	Q02354	440 aa	Known RBP	4.66	□□□□□ -1.66
UBA3	YPR066W	YML122C	Q03207	126 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	TRM12	Q04235	462 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	IPK1	Q06667	281 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	VPS68	Q12016	184 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	REX3	Q12090	404 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	YIL046W-A	Q3E7Z4	54 aa		4.66	□□□□□ -1.66
UBA3	YPR066W	CDC21	P06785	304 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	EPT1	P22140	391 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	LSB5	P25369	354 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	YCL068C	P25593	260 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	YCR099C	P25657	155 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	TIP1	P27654	210 aa	Predicted RBP	4.65	□□□□□ -1.67
UBA3	YPR066W	MTC4	P38335	694 aa	Known RBP	4.65	□□□□□ -1.67
UBA3	YPR066W	YHI9	P38765	294 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	CYC2	P38909	366 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	RPC17	P47076	161 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	TIS11	P47977	285 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	YNR048W	P53740	393 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	PDR16	P53860	351 aa	Known RBP	4.65	□□□□□ -1.67
UBA3	YPR066W	RSN1	Q03516	953 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	RGT2	Q12300	763 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	SFG1	Q12507	346 aa		4.65	□□□□□ -1.67
UBA3	YPR066W	TRA1	P38811	3744 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	STE2	D6VTK4	431 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	QCR6	P00127	147 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	STF1	P01098	86 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	CMD1	P06787	147 aa	Known RBP	4.64	□□□□□ -1.67
UBA3	YPR066W	YKR104W	P0CE69	306 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	SPT15	P13393	240 aa	Known RBP	4.64	□□□□□ -1.67
UBA3	YPR066W	YPT53	P36019	220 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	POP4	P38336	279 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	BZZ1	P38822	633 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	YEL073C	P39974	107 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	YER079W	P40052	210 aa	Known RBP	4.64	□□□□□ -1.67
UBA3	YPR066W	ALG8	P40351	577 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	POP6	P53218	158 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	YNR068C	P53754	272 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	EMI1	Q04406	187 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	SGT1	Q08446	395 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	AYT1	Q12226	474 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	RNH203	Q12338	110 aa		4.64	□□□□□ -1.67
UBA3	YPR066W	RPL15A	P05748	204 aa	Known RBP	4.63	□□□□□ -1.67
UBA3	YPR066W	CRM1	P30822	1084 aa	Known RBP	4.63	□□□□□ -1.67
UBA3	YPR066W	SPR1	P32603	445 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	RRP1	P35178	278 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3	YPR066W	SOL2	P37262	315 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	MRP21	P38175	177 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	SPP381	P38282	291 aa	Predicted RBP	4.63	□□□□□ -1.67
UBA3	YPR066W	RPR2	P40571	144 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	PAC11	P40960	533 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	EFM3	P47163	339 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	SHE4	P51534	789 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	BET5	Q03630	159 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	NUP53	Q03790	475 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	SRL2	Q12020	392 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	YMR030W-A	Q3E760	96 aa		4.63	□□□□□ -1.67
UBA3	YPR066W	ARG4	P04076	463 aa	Predicted RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	DST1	P07273	309 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	SCL1	P21243	252 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	SEC14	P24280	304 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	PMU1	P36069	295 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	MRPL37	P36532	105 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	DED81	P38707	554 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	YHR177W	P38867	453 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	PMT5	P52867	743 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	RPL22B	P56628	122 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	YPL068C	Q02749	293 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	STD1	Q02794	444 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	RRB1	Q04225	511 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	ERP1	Q05359	219 aa	Known RBP	4.62	□□□□□ -1.67
UBA3	YPR066W	PLB3	Q08108	686 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	TIM18	Q08749	192 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	PST1	Q12355	444 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	SRN2	Q99176	213 aa		4.62	□□□□□ -1.67
UBA3	YPR066W	OPI3	P05375	206 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	RPL20A	P0CX23	172 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	RPL20B	P0CX24	172 aa	Predicted RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	NSP1	P14907	823 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms