RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W NAS2P40555 220 aa1.32□□□□□ -2.2
YOP1YPR028W YCH1P42937 148 aa1.32□□□□□ -2.2
YOP1YPR028W NAS6P50086 228 aa1.32□□□□□ -2.2
YOP1YPR028W HCH1P53834 153 aa1.32□□□□□ -2.2
YOP1YPR028W RPN8Q08723 338 aaKnown RBP1.32□□□□□ -2.2
YOP1YPR028W DDC1Q08949 612 aa1.32□□□□□ -2.2
YOP1YPR028W YDR262WQ12331 272 aa1.32□□□□□ -2.2
YOP1YPR028W APC2Q12440 853 aa1.32□□□□□ -2.2
YOP1YPR028W SPO24Q3E752 67 aa1.32□□□□□ -2.2
YOP1YPR028W GAL3P13045 520 aa1.31□□□□□ -2.2
YOP1YPR028W CTA1P15202 515 aa1.31□□□□□ -2.2
YOP1YPR028W KRR1P25586 316 aaPredicted RBP1.31□□□□□ -2.2
YOP1YPR028W ITR2P30606 609 aa1.31□□□□□ -2.2
YOP1YPR028W ACB1P31787 87 aa1.31□□□□□ -2.2
YOP1YPR028W SRB2P34162 210 aa1.31□□□□□ -2.2
YOP1YPR028W RRT13P40042 185 aa1.31□□□□□ -2.2
YOP1YPR028W PFS2P42841 465 aaKnown RBP1.31□□□□□ -2.2
YOP1YPR028W HIT1P46973 164 aa1.31□□□□□ -2.2
YOP1YPR028W COQ5P49017 307 aa1.31□□□□□ -2.2
YOP1YPR028W TAF6P53040 516 aa1.31□□□□□ -2.2
YOP1YPR028W YGR067CP53243 804 aa1.31□□□□□ -2.2
YOP1YPR028W NRM1P53718 249 aa1.31□□□□□ -2.2
YOP1YPR028W SED5Q01590 340 aa1.31□□□□□ -2.2
YOP1YPR028W RVB1Q03940 463 aaKnown RBP1.31□□□□□ -2.2
YOP1YPR028W MGR3Q04472 501 aa1.31□□□□□ -2.2
YOP1YPR028W BUR2Q05949 395 aa1.31□□□□□ -2.2
YOP1YPR028W SPH1Q06160 661 aa1.31□□□□□ -2.2
YOP1YPR028W MMT2Q08970 484 aa1.31□□□□□ -2.2
YOP1YPR028W TAF10Q12030 206 aa1.31□□□□□ -2.2
YOP1YPR028W TIR4Q12218 487 aaPredicted RBP1.31□□□□□ -2.2
YOP1YPR028W RPN6Q12377 434 aa1.31□□□□□ -2.2
YOP1YPR028W YOL085CQ99345 113 aa1.31□□□□□ -2.2
YOP1YPR028W MEI5P32489 222 aa1.3□□□□□ -2.2
YOP1YPR028W FMT1P32785 401 aa1.3□□□□□ -2.2
YOP1YPR028W CYM1P32898 989 aa1.3□□□□□ -2.2
YOP1YPR028W TIP20P33891 701 aa1.3□□□□□ -2.2
YOP1YPR028W KTI12P34253 313 aaKnown RBP1.3□□□□□ -2.2
YOP1YPR028W PRY2P36110 329 aa1.3□□□□□ -2.2
YOP1YPR028W YFR018CP43599 363 aa1.3□□□□□ -2.2
YOP1YPR028W PXR1P53335 271 aaPredicted RBP1.3□□□□□ -2.2
YOP1YPR028W SCS7Q03529 384 aa1.3□□□□□ -2.2
YOP1YPR028W API2Q04413 109 aa1.3□□□□□ -2.2
YOP1YPR028W APC4Q04601 652 aa1.3□□□□□ -2.2
YOP1YPR028W FAR10Q06001 478 aa1.3□□□□□ -2.2
YOP1YPR028W DTD1Q07648 150 aaKnown RBP1.3□□□□□ -2.2
YOP1YPR028W PRM4Q12498 284 aa1.3□□□□□ -2.2
YOP1YPR028W YAL067W-AQ8TGK6 75 aa1.3□□□□□ -2.2
YOP1YPR028W MHP1P43638 1398 aa1.3□□□□□ -2.2
YOP1YPR028W VPS63O13549 108 aa1.29□□□□□ -2.2
YOP1YPR028W STF1P01098 86 aa1.29□□□□□ -2.2
YOP1YPR028W REP1P03871 373 aa1.29□□□□□ -2.2
YOP1YPR028W CDC37P06101 506 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W FUS3P16892 353 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W CKA2P19454 339 aa1.29□□□□□ -2.2
YOP1YPR028W PET18P25362 215 aa1.29□□□□□ -2.2
YOP1YPR028W TPS2P31688 896 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W DBP7P36120 742 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W TAE1P38340 232 aa1.29□□□□□ -2.2
YOP1YPR028W SMF2P38778 549 aa1.29□□□□□ -2.2
YOP1YPR028W FHL1P39521 936 aa1.29□□□□□ -2.2
YOP1YPR028W SSO2P39926 295 aa1.29□□□□□ -2.2
YOP1YPR028W UTP25P40498 721 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W UFE1P41834 346 aa1.29□□□□□ -2.2
YOP1YPR028W YGR168CP53293 376 aa1.29□□□□□ -2.2
YOP1YPR028W UTP15Q04305 513 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W MRX8Q05473 314 aa1.29□□□□□ -2.2
YOP1YPR028W YLR297WQ05899 129 aa1.29□□□□□ -2.2
YOP1YPR028W MRX9Q07349 420 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W YOL029CQ08187 201 aa1.29□□□□□ -2.2
YOP1YPR028W RDL2Q08742 149 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W SLF1Q12034 447 aaKnown RBP1.29□□□□□ -2.2
YOP1YPR028W AUS1Q08409 1394 aa1.29□□□□□ -2.2
YOP1YPR028W RPL18AP0CX49 186 aaKnown RBP1.28□□□□□ -2.2
YOP1YPR028W RPL18BP0CX50 186 aaKnown RBP1.28□□□□□ -2.2
YOP1YPR028W CBF5P33322 483 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
YOP1YPR028W YKL187CP34231 750 aa1.28□□□□□ -2.2
YOP1YPR028W TRR2P38816 342 aa1.28□□□□□ -2.2
YOP1YPR028W POP2P39008 433 aa1.28□□□□□ -2.2
YOP1YPR028W END3P39013 349 aa1.28□□□□□ -2.2
YOP1YPR028W FRT2P39734 528 aa1.28□□□□□ -2.2
YOP1YPR028W INA22P40576 216 aa1.28□□□□□ -2.2
YOP1YPR028W YIR035CP40579 254 aa1.28□□□□□ -2.2
YOP1YPR028W MIC19P43594 170 aa1.28□□□□□ -2.2
YOP1YPR028W TPC1P53257 314 aa1.28□□□□□ -2.2
YOP1YPR028W HST4P53688 370 aa1.28□□□□□ -2.2
YOP1YPR028W IRC4Q03036 179 aa1.28□□□□□ -2.2
YOP1YPR028W UBX2Q04228 584 aa1.28□□□□□ -2.2
YOP1YPR028W VPS20Q04272 221 aa1.28□□□□□ -2.2
YOP1YPR028W STE23Q06010 1027 aa1.28□□□□□ -2.2
YOP1YPR028W YLR012CQ07927 99 aa1.28□□□□□ -2.2
YOP1YPR028W REX3Q12090 404 aa1.28□□□□□ -2.2
YOP1YPR028W RTC5Q12108 567 aaKnown RBP1.28□□□□□ -2.2
YOP1YPR028W YPL245WQ12179 454 aaKnown RBP1.28□□□□□ -2.2
YOP1YPR028W YDR018CQ12185 396 aa1.28□□□□□ -2.2
YOP1YPR028W FLO11P08640 1367 aa1.27□□□□□ -2.21
YOP1YPR028W SAL1D6W196 494 aa1.27□□□□□ -2.21
YOP1YPR028W MSS116P15424 664 aaKnown RBP1.27□□□□□ -2.21
YOP1YPR028W ERD1P16151 362 aa1.27□□□□□ -2.21
YOP1YPR028W YPS1P32329 569 aa1.27□□□□□ -2.21
YOP1YPR028W SKG6P32900 734 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms